Mercurial > repos > iuc > package_fastx_toolkit_0_0_14

comparison tool_dependencies.xml @ 9:ebe91775fed7 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_fastx_toolkit_0_0_14 commit 231157132a50f5bc8f9d0c8151c4ddca86c97213-dirty
author iuc
date Thu, 15 Sep 2016 07:56:40 -0400
parents f5725bc779f6
children
comparison
equal deleted inserted replaced
8:f5725bc779f6 9:ebe91775fed7
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="libgtextutils" version="0.7"> 3 <package name="libgtextutils" version="0.7">
4 <repository changeset_revision="d494074f5161" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="805867efe06b" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="fastx_toolkit" version="0.0.14"> 6 <package name="fastx_toolkit" version="0.0.14">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions_group> 8 <actions_group>
9 <actions architecture="x86_64" os="darwin"> 9 <actions architecture="x86_64" os="darwin">
10 <action sha256sum="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806" type="download_by_url">https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2</action> 10 <action sha256sum="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806" type="download_by_url">https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2</action>
11 <action type="set_environment_for_install"> 11 <action type="set_environment_for_install">
12 <repository changeset_revision="d494074f5161" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 12 <repository changeset_revision="805867efe06b" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
13 <package name="libgtextutils" version="0.7" /> 13 <package name="libgtextutils" version="0.7" />
14 </repository> 14 </repository>
15 </action> 15 </action>
16 <action type="shell_command"> 16 <action type="shell_command">
17 export MACOSX_DEPLOYMENT_TARGET=10.7 &amp;&amp;
18 CXXFLAGS="${CXXFLAGS} -std=c++11 -stdlib=libc++" &amp;&amp; 17 CXXFLAGS="${CXXFLAGS} -std=c++11 -stdlib=libc++" &amp;&amp;
19 ./configure --prefix=$INSTALL_DIR --disable-wall &amp;&amp; make &amp;&amp; make install </action> 18 ./configure --prefix=$INSTALL_DIR --disable-wall &amp;&amp; make &amp;&amp; make install </action>
20 <action type="set_environment"> 19 <action type="set_environment">
21 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 20 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
22 </action> 21 </action>
23 </actions> 22 </actions>
24 <actions> 23 <actions>
25 <action sha256sum="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806" type="download_by_url">https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2</action> 24 <action sha256sum="9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806" type="download_by_url">https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2</action>
26 <action type="set_environment_for_install"> 25 <action type="set_environment_for_install">
27 <repository changeset_revision="d494074f5161" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 26 <repository changeset_revision="805867efe06b" name="package_libgtextutils_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
28 <package name="libgtextutils" version="0.7" /> 27 <package name="libgtextutils" version="0.7" />
29 </repository> 28 </repository>
30 </action> 29 </action>
31 <action type="autoconf">--disable-wall</action> 30 <action type="autoconf">--disable-wall</action>
32 <action type="set_environment"> 31 <action type="set_environment">