Mercurial > repos > iuc > package_eigen_3_2

annotate tool_dependencies.xml @ 0:94ced55dee5f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
author iuc
date Sun, 01 Nov 2015 07:15:33 -0500
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children d40075a7863d
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94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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1 <?xml version="1.0"?>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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2 <tool_dependency>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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3 <package name="cmake" version="3.2.3">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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4 <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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5 </package>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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6 <package name="eigen3" version="3.2">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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7 <install version="1.0">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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8 <actions>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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9 <action type="download_by_url">https://bitbucket.org/eigen/eigen/get/3.2.6.tar.bz2</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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10
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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11 <action type="set_environment_for_install">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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12 <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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13 <package name="cmake" version="3.2.3" />
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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14 </repository>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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15 </action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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17 <action type="make_directory">$INSTALL_DIR/unpacked_source</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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18 <action type="shell_command">cp -r * $INSTALL_DIR/unpacked_source</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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19 <action type="make_directory">build</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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20 <action type="change_directory">build</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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21
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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22 <action type="shell_command">cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/eigen3/</action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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23 <action type="make_install" />
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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24
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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25 <action type="set_environment">
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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26 <environment_variable action="set_to" name="EIGEN3_SOURCE_PATH">$INSTALL_DIR/unpacked_source</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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27 <environment_variable action="set_to" name="EIGEN3_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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28 <environment_variable action="set_to" name="EIGEN3_LIB_PATH">$INSTALL_DIR/eigen3/lib</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
iuc
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29 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/eigen3/lib</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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30 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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31 <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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32 </action>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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33 </actions>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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34 </install>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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35 <readme>Downloading and compiling the eigen3 library and unpacking it to the EIGEN3_SOURCE_PATH. EIGEN3_INCLUDE_PATH and EIGEN3_LIB_PATH will be available.</readme>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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36 </package>
94ced55dee5f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_2 commit 3b807ce58b3e8ca23298941ad50314eb5486f3f7
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37 </tool_dependency>