Mercurial > repos > iuc > package_dexseq_1_14

comparison tool_dependencies.xml @ 8:34c420097324 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_dexseq_1_14 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:13:04 -0500
parents 6346a4883a01
children
comparison
equal deleted inserted replaced
7:6346a4883a01 8:34c420097324
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="R" version="3.2.1"> 3 <package name="R" version="3.2.1">
4 <repository changeset_revision="798497c71146" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="c6ebd3a51334" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="cairo" version="1.14.2"> 6 <package name="cairo" version="1.14.2">
7 <repository changeset_revision="696336a3e1b2" name="package_cairo_1_14_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="66ad0cc12007" name="package_cairo_1_14_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="tiff" version="4.0.3"> 9 <package name="tiff" version="4.0.3">
10 <repository changeset_revision="3fecd5a9a64c" name="package_tiff_4_0_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="3fecd5a9a64c" name="package_tiff_4_0_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="freetype" version="2.5.2"> 12 <package name="freetype" version="2.5.2">
13 <repository changeset_revision="2460955a5704" name="package_freetype_2_5_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="a2cc77cfe7fc" name="package_freetype_2_5_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="pixman" version="0.32.6"> 15 <package name="pixman" version="0.32.6">
16 <repository changeset_revision="2db67636b074" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 16 <repository changeset_revision="82d1a680686f" name="package_pixman_0_32_6" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
17 </package> 17 </package>
18 <package name="libpng" version="1.6.7"> 18 <package name="libpng" version="1.6.7">
19 <repository changeset_revision="ac6ef08bf0e6" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 19 <repository changeset_revision="3571cd50dda2" name="package_libpng_1_6_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
20 </package> 20 </package>
21 <package name="libxml2" version="2.9.1"> 21 <package name="libxml2" version="2.9.1">
22 <repository changeset_revision="df7589f53a88" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 22 <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
23 </package> 23 </package>
24 <package name="libcurl" version="7.35"> 24 <package name="libcurl" version="7.35">
25 <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 25 <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
26 </package> 26 </package>
27 <package name="dexseq" version="1.14"> 27 <package name="dexseq" version="1.14">
28 <install version="1.0"> 28 <install version="1.0">
29 <actions> 29 <actions>
30 <action type="setup_r_environment"> 30 <action type="setup_r_environment">
31 <repository changeset_revision="798497c71146" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 31 <repository changeset_revision="c6ebd3a51334" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
32 <package name="R" version="3.2.1" /> 32 <package name="R" version="3.2.1" />
33 </repository> 33 </repository>
34 <repository changeset_revision="3fecd5a9a64c" name="package_tiff_4_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 34 <repository changeset_revision="3fecd5a9a64c" name="package_tiff_4_0_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
35 <package name="tiff" version="4.0.3" /> 35 <package name="tiff" version="4.0.3" />
36 </repository> 36 </repository>
37 <repository changeset_revision="696336a3e1b2" name="package_cairo_1_14_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 37 <repository changeset_revision="66ad0cc12007" name="package_cairo_1_14_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
38 <package name="cairo" version="1.14.2" /> 38 <package name="cairo" version="1.14.2" />
39 </repository> 39 </repository>
40 <repository changeset_revision="2460955a5704" name="package_freetype_2_5_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 40 <repository changeset_revision="a2cc77cfe7fc" name="package_freetype_2_5_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
41 <package name="freetype" version="2.5.2" /> 41 <package name="freetype" version="2.5.2" />
42 </repository> 42 </repository>
43 <repository changeset_revision="2db67636b074" name="package_pixman_0_32_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 43 <repository changeset_revision="82d1a680686f" name="package_pixman_0_32_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
44 <package name="pixman" version="0.32.6" /> 44 <package name="pixman" version="0.32.6" />
45 </repository> 45 </repository>
46 <repository changeset_revision="ac6ef08bf0e6" name="package_libpng_1_6_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 46 <repository changeset_revision="3571cd50dda2" name="package_libpng_1_6_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
47 <package name="libpng" version="1.6.7" /> 47 <package name="libpng" version="1.6.7" />
48 </repository> 48 </repository>
49 <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 49 <repository changeset_revision="8d4b20e45bd1" name="package_libcurl_7_35" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
50 <package name="libcurl" version="7.35" /> 50 <package name="libcurl" version="7.35" />
51 </repository> 51 </repository>
52 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 --> 52 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
53 <repository changeset_revision="df7589f53a88" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 53 <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
54 <package name="libxml2" version="2.9.1" /> 54 <package name="libxml2" version="2.9.1" />
55 </repository> 55 </repository>
56 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Cairo_1.5-8.tar.gz</package> 56 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Cairo_1.5-8.tar.gz</package>
57 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/rjson_0.2.15.tar.gz</package> 57 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/rjson_0.2.15.tar.gz</package>
58 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/getopt_1.20.0.tar.gz</package> 58 <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/getopt_1.20.0.tar.gz</package>