<?xml version="1.0"?>
<tool_dependency>
    <package name="perl" version="5.18.1">
        <repository changeset_revision="6f144bd786a8" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="libgd" version="2.1.0">
        <repository changeset_revision="1d6054c3c159" name="package_libgd_2_1_0" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="circos" version="0.67.5">
        <install version="1.0">
            <actions>
                <action type="setup_perl_environment">
                    <repository changeset_revision="6f144bd786a8" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="perl" version="5.18.1" />
                    </repository>
                    <repository changeset_revision="1d6054c3c159" name="package_libgd_2_1_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="libgd" version="2.1.0" />
                    </repository>
                    <package>http://www.cpan.org/authors/id/Z/ZE/ZEFRAM/Carp-1.3301.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/G/GA/GARU/Clone-0.38.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/T/TL/TLINDEN/Config-General-2.56.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SM/SMUELLER/PathTools-3.47.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SM/SMUELLER/Data-Dumper-2.154.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/G/GA/GAAS/Digest-MD5-2.54.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SM/SMUELLER/PathTools-3.47.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/D/DA/DAGOLDEN/File-Temp-0.2304.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/G/GA/GAAS/IO-String-1.08.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/M/MH/MHOSKEN/Font-TTF-1.05.tar.gz</package>
                    <package>http://share.gruenings.eu/GD-2.56.tar.gz</package>
                    <package>http://pkgs.fedoraproject.org/repo/pkgs/perl-Getopt-Long/Getopt-Long-2.45.tar.gz/md5/ea5c085b30915efe522f9ac58fcc343d/Getopt-Long-2.45.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/T/TO/TOBYINK/Exporter-Tiny-0.042.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/R/RE/REHSACK/List-MoreUtils-0.404.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.41.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/G/GR/GROMMEL/Math-Round-0.07.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/A/AS/ASPINELLI/Math-VecStat-0.08.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/D/DO/DOY/Try-Tiny-0.22.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/Z/ZE/ZEFRAM/Module-Runtime-0.014.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/R/RJ/RJBS/Test-Fatal-0.014.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/T/TO/TOKUHIROM/Test-Requires-0.08.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/D/DR/DROLSKY/Module-Implementation-0.09.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/D/DR/DROLSKY/Params-Validate-1.17.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/M/MA/MAREKR/Pod-Usage-1.64.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SA/SANKO/Readonly-2.00.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/A/AB/ABIGAIL/Regexp-Common-2013031301.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/W/WR/WRW/Number-Format-1.73.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/J/JE/JETTERO/Statistics-Basic-1.6611.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/A/AM/AMS/Storable-2.51.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SH/SHLOMIF/Text-Format-0.59.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/Z/ZE/ZEFRAM/Time-HiRes-1.9726.tar.gz</package>
                    <package>http://www.cpan.org/authors/id/S/SZ/SZABGAB/SVG-2.63.tar.gz</package>
                    <package>https://cpan.metacpan.org/authors/id/A/AB/ABW/Math-Bezier-0.01.tar.gz</package>
                    <package>https://cpan.metacpan.org/authors/id/S/SW/SWMCD/Set-IntSpan-1.19.tar.gz</package>
                </action>
                <action type="download_file">http://circos.ca/distribution/circos-0.67-5.tgz</action>
                <action type="shell_command">tar xzf circos-0.67-5.tgz</action>
                <action type="shell_command">sed -i 's/\/bin\/env/\/usr\/bin\/env/' circos-0.67-5/bin/circos circos-0.67-5/bin/gddiag</action>
                <action type="shell_command">cp circos-0.67-5/* $INSTALL_DIR -R</action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            
Circular visualization
======================

"Circos is a software package for visualizing data and information. It
visualizes data in a circular layout — this makes Circos ideal for exploring
relationships between objects or positions. There are other reasons why a
circular layout is advantageous, not the least being the fact that it is
attractive.

Circos is ideal for creating publication-quality infographics and illustrations
with a high data-to-ink ratio, richly layered data and pleasant symmetries. You
have fine control each element in the figure to tailor its focus points and
detail to your audience."

        </readme>
    </package>
</tool_dependency>