--- a/tool_dependencies.xml	Fri May 29 17:03:37 2015 -0400
+++ b/tool_dependencies.xml	Mon Jan 11 10:36:44 2016 -0500
@@ -1,26 +1,20 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="perl" version="5.18.1">
-        <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="6f144bd786a8" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="libgd" version="2.1.0">
-        <repository changeset_revision="88f469bfafbf" name="package_libgd_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="1d6054c3c159" name="package_libgd_2_1_0" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="circos" version="0.67.5">
         <install version="1.0">
             <actions>
-                <action type="set_environment_for_install">
-                    <repository changeset_revision="88f469bfafbf" name="package_libgd_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="libgd" version="2.1" />
+                <action type="setup_perl_environment">
+                    <repository changeset_revision="6f144bd786a8" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="perl" version="5.18.1" />
                     </repository>
-                </action>
-
-                <action type="setup_perl_environment">
-                    <repository changeset_revision="f6efd799dc70" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="perl" prior_installation_required="True" version="5.18.1" />
-                    </repository>
-                    <repository changeset_revision="88f469bfafbf" name="package_libgd_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="libgd" prior_installation_required="True" version="2.1" />
+                    <repository changeset_revision="1d6054c3c159" name="package_libgd_2_1_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="libgd" version="2.1.0" />
                     </repository>
                     <package>http://www.cpan.org/authors/id/Z/ZE/ZEFRAM/Carp-1.3301.tar.gz</package>
                     <package>http://www.cpan.org/authors/id/G/GA/GARU/Clone-0.38.tar.gz</package>
@@ -33,7 +27,7 @@
                     <package>http://www.cpan.org/authors/id/G/GA/GAAS/IO-String-1.08.tar.gz</package>
                     <package>http://www.cpan.org/authors/id/M/MH/MHOSKEN/Font-TTF-1.05.tar.gz</package>
                     <package>http://share.gruenings.eu/GD-2.56.tar.gz</package>
-                    <package>http://www.cpan.org/authors/id/J/JV/JV/Getopt-Long-2.45.tar.gz</package>
+                    <package>http://pkgs.fedoraproject.org/repo/pkgs/perl-Getopt-Long/Getopt-Long-2.45.tar.gz/md5/ea5c085b30915efe522f9ac58fcc343d/Getopt-Long-2.45.tar.gz</package>
                     <package>http://www.cpan.org/authors/id/T/TO/TOBYINK/Exporter-Tiny-0.042.tar.gz</package>
                     <package>http://www.cpan.org/authors/id/R/RE/REHSACK/List-MoreUtils-0.404.tar.gz</package>
                     <package>http://www.cpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.41.tar.gz</package>