|
0
|
1 <tool_dependency>
|
|
|
2 <package name="CCAT" version="3.0">
|
|
|
3 <install version="1.0">
|
|
|
4 <actions>
|
|
|
5 <action type="download_by_url">http://cmb.gis.a-star.edu.sg/ChIPSeq/tools/CCAT3.0.tar.gz</action>
|
|
|
6 <action type="change_directory">src</action>
|
|
|
7 <action type="shell_command">./make</action>
|
|
|
8 <action type="move_file">
|
|
|
9 <source>../bin/CCAT</source>
|
|
|
10 <destination>$INSTALL_DIR/bin</destination>
|
|
|
11 </action>
|
|
|
12
|
|
|
13 <action type="set_environment">
|
|
|
14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
|
|
|
15 </action>
|
|
|
16 </actions>
|
|
|
17 </install>
|
|
|
18 <readme>Downloading and compiling CCAT. A Signal-Noise model for significance analysis of ChIP-seq with Negative Control.</readme>
|
|
|
19 </package>
|
|
|
20 </tool_dependency>
|
