Mercurial > repos > iuc > package_bx_python_0_7

annotate tool_dependencies.xml @ 7:23eaacfed7a8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bx_python_0_7 commit 45a64d82dfada34d826be98a1f7a0657f9148d59
author iuc
date Sat, 30 May 2015 22:44:30 -0400
parents e77baa8ab052
children 6a811020ff2f
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="numpy" version="1.7.1">
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4 <repository changeset_revision="bbfe29f56566" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="bx-python" version="0.7.1">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">https://pypi.python.org/packages/source/b/bx-python/bx-python-0.7.1.tar.gz</action>
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11 <action type="set_environment_for_install">
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12 <repository changeset_revision="bbfe29f56566" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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13 <package name="numpy" version="1.7.1" />
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14 </repository>
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15 </action>
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17 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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18 <action type="shell_command">
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19 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
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20 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
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21 <action type="set_environment">
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22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
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23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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24 <environment_variable action="set_to" name="BX_PYTHON_PATH">$INSTALL_DIR</environment_variable>
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25 </action>
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26 </actions>
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27 </install>
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28 <readme>
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29 Installation of bx-python. The installation can be accessed via BX_PYTHON_PATH.
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30 </readme>
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31 </package>
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32 </tool_dependency>