Mercurial > repos > iuc > package_bowtie_2_2_5
annotate tool_dependencies.xml @ 1:f3b301780e36 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 5c84ce50aff06cc7a1bad32557d9ca37bbc2afc0
| author | iuc |
|---|---|
| date | Wed, 13 May 2015 09:21:39 -0400 |
| parents | 185ac8aa311e |
| children | e627be2bba58 |
| rev | line source |
|---|---|
|
0
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
2 <tool_dependency> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
3 <package name="bowtie2" version="2.2.5"> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
4 <install version="1.0"> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
5 <actions_group> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
6 <actions os="linux" architecture="x86_64"> |
|
1
f3b301780e36
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 5c84ce50aff06cc7a1bad32557d9ca37bbc2afc0
iuc
parents:
0
diff
changeset
|
7 <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/bowtie2/bowtie2-2.2.5-Linux-x86_64.tar.gz</action> |
|
0
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
8 <action type="move_directory_files"> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
9 <source_directory>.</source_directory> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
10 <destination_directory>$INSTALL_DIR</destination_directory> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
11 </action> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
12 </actions> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
13 <action type="set_environment"> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
15 </action> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
16 </actions_group> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
17 </install> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
18 <readme></readme> |
|
185ac8aa311e
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 35cfc3a25d68721360ad6ca18329f036577f1abc
iuc
parents:
diff
changeset
|
19 </package> |
|
1
f3b301780e36
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bowtie_2_2_5 commit 5c84ce50aff06cc7a1bad32557d9ca37bbc2afc0
iuc
parents:
0
diff
changeset
|
20 </tool_dependency> |
