Mercurial > repos > iuc > package_bedtools_2_24

annotate tool_dependencies.xml @ 0:e6f4a7398a47 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
author iuc
date Fri, 12 Jun 2015 14:50:01 -0400
parents
children c8fa8e1bf77d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
2 <tool_dependency>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
3 <package name="bedtools" version="2.24">
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
4 <install version="1.0">
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
5 <actions>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
6 <action type="download_by_url">https://github.com/arq5x/bedtools2/releases/download/v2.24.0/bedtools-2.24.0.tar.gz</action>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
7 <action type="shell_command">make</action>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
8 <action type="move_directory_files">
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
9 <source_directory>bin</source_directory>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
11 </action>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
12 <action type="set_environment">
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
14 </action>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
15 </actions>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
16 </install>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
17 <readme>BEDTools is a collection of utilities for comparing, summarizing, and intersecting genomic features in BED, GTF/GFF, VCF and BAM formats.</readme>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
18 </package>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
19 </tool_dependency>
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
20
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
21
e6f4a7398a47 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_24 commit 11ce5e843d482d8726b61accc3f11364260b5ea7-dirty
iuc
parents:
diff changeset
22