Mercurial > repos > iuc > ont_fast5_api_fast5_subset

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"planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
author iuc
date Mon, 08 Jun 2020 19:56:06 +0000
parents
children 41bac7dcb43e
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b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
iuc
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1 <?xml version="1.0"?>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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2 <macros>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
iuc
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3 <token name="@TOOL_VERSION@">3.1.3</token>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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4 <xml name="requirements">
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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5 <requirements>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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6 <requirement type="package" version="@TOOL_VERSION@">ont-fast5-api</requirement>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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7 </requirements>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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8 </xml>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
iuc
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9 <xml name="citations">
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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10 <citations>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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11 <citation type="bibtex">@online{ont_fast5_api,
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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12 author = {Oxford Nanopore Technologies },
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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13 title = {ont_fast5_api},
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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14 year = 2020,
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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15 url = {https://github.com/nanoporetech/ont_fast5_api},
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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16 urldate = {2020-06-01}
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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17 }</citation>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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18 </citations>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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19 </xml>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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20 <token name="@WID@"><![CDATA[
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21 ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore FAST5 file format.
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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22
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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23 - Concrete implementation of the FAST5 file schema using the generic h5py library
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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24 - Plain-english-named methods to interact with and reflect the FAST5 file schema
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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25 - Tools to convert between multi_read and single_read formats
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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26 - Tools to compress/decompress raw data in files
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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27 ]]></token>
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28 <token name="@REFERENCES@"><![CDATA[
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29 More information are available on `github <https://github.com/nanoporetech/ont_fast5_api>`_.
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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30 ]]></token>
b380520b4420 "planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 84504d6786e9edf00367739210d6bae78cb42cc8"
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31 </macros>