Mercurial > repos > iuc > ncbi_eutils_esearch

comparison esearch.xml @ 1:6d1aba0b33e1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 2d92a2be8d8725e76a32600e332dfb67cc0db10b
author iuc
date Mon, 02 Nov 2015 12:59:56 -0500
parents 6ba298236729
children 0ea34f262410
comparison
equal deleted inserted replaced
0:6ba298236729 1:6d1aba0b33e1
3 <description>search NCBI Databases by text query</description> 3 <description>search NCBI Databases by text query</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <expand macro="stdio"/>
9 <version_command>python esearch.py --version</version_command> 8 <version_command>python esearch.py --version</version_command>
10 <command interpreter="python"><![CDATA[esearch.py 9 <command detect_errors="aggressive" interpreter="python"><![CDATA[esearch.py
11 $db_select 10 $db_select
12 "$term" 11 "$term"
13 12
14 #if $history_file and $history_file is not None: 13 #if $history_file and $history_file is not None:
15 --history_file $history_file 14 --history_file $history_file
16 #end if 15 #end if
17 16
18 $use_history 17 $use_history
19 18
20 #if $date.enabled: 19 #if $date.enabled:
32 --maxdate $date.maxdate 31 --maxdate $date.maxdate
33 #end if 32 #end if
34 #end if 33 #end if
35 34
36 #if $use_history: 35 #if $use_history:
37 --history_out $history 36 --history_out $history
38 #end if 37 #end if
39 38
40 @EMAIL_ARGUMENTS@ 39 @EMAIL_ARGUMENTS@
41 > $default]]></command> 40 > $default]]></command>
42 <inputs> 41 <inputs>
48 <add value="["/> 47 <add value="["/>
49 <add value="]"/> 48 <add value="]"/>
50 </valid> 49 </valid>
51 </sanitizer> 50 </sanitizer>
52 </param> 51 </param>
53 <param label="Filter existing history" name="history_file" type="data" format="ncbi_history" optional="True"/> 52 <param label="Filter existing history" name="history_file" type="data" format="json" optional="True"/>
54 <param checked="false" label="Store results to history server" name="use_history" type="boolean" truevalue="--use_history" falsevalue=""/> 53 <param checked="false" label="Store results to history server" name="use_history" type="boolean" truevalue="--use_history" falsevalue=""/>
55 <conditional name="date"> 54 <conditional name="date">
56 <param label="Filter By Date" type="boolean" truevalue="True" falsevalue="False" checked="false" name="enabled"/> 55 <param label="Filter By Date" type="boolean" truevalue="True" falsevalue="False" checked="false" name="enabled"/>
57 <when value="True"> 56 <when value="True">
58 <param label="Date type" name="datetype" type="select"> 57 <param label="Date type" name="datetype" type="select">