Mercurial > repos > iuc > ncbi_eutils_epost
comparison epost.xml @ 0:6defb4c34d01 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 780c9984a9c44d046aadf1e316a668d1e53aa1f0
| author | iuc |
|---|---|
| date | Sat, 31 Oct 2015 12:44:41 -0400 |
| parents | |
| children | 229a09be31fe |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:6defb4c34d01 |
|---|---|
| 1 <?xml version="1.0"?> | |
| 2 <tool id="ncbi_eutils_epost" name="NCBI EPost" version="@WRAPPER_VERSION@"> | |
| 3 <description>post UIDs to NCBI History Server</description> | |
| 4 <macros> | |
| 5 <import>macros.xml</import> | |
| 6 </macros> | |
| 7 <expand macro="requirements"/> | |
| 8 <expand macro="stdio"/> | |
| 9 <version_command>python epost.py --version</version_command> | |
| 10 <command interpreter="python"><![CDATA[epost.py | |
| 11 $db_select | |
| 12 | |
| 13 @EMAIL_ARGUMENTS@ | |
| 14 | |
| 15 @LIST_OR_HIST@ | |
| 16 | |
| 17 > $history | |
| 18 ]]></command> | |
| 19 <inputs> | |
| 20 <expand macro="dbselect"/> | |
| 21 <expand macro="list_or_hist"/> | |
| 22 </inputs> | |
| 23 <outputs> | |
| 24 <expand macro="history_out"/> | |
| 25 </outputs> | |
| 26 <tests> | |
| 27 <test> | |
| 28 <param name="db_select" value="nuccore"/> | |
| 29 <param name="qss" value="id_list"/> | |
| 30 <param name="id_list" value="126697566"/> | |
| 31 <output name="history" file="example.history.json" compare="sim_size" delta="10"/> | |
| 32 </test> | |
| 33 </tests> | |
| 34 <help><![CDATA[ | |
| 35 NCBI Entrez EPost | |
| 36 ================= | |
| 37 | |
| 38 Accepts a list of UIDs from a given database, stores the set on the History | |
| 39 Server, and responds with an NCBI History reference. | |
| 40 | |
| 41 @REFERENCES@ | |
| 42 | |
| 43 @DISCLAIMER@ | |
| 44 ]]></help> | |
| 45 <expand macro="citations"/> | |
| 46 </tool> |