Mercurial > repos > iuc > ncbi_eutils_efetch

diff efetch.xml @ 4:c26d1863f3f3 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit e0575333e6f08ef02fc66c2764b43ebd15c6b04b
author iuc
date Fri, 10 Jun 2016 15:03:49 -0400
parents aa88712a7536
children e269b3b5185b
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line diff
--- a/efetch.xml	Fri Jun 10 14:49:12 2016 -0400
+++ b/efetch.xml	Fri Jun 10 15:03:49 2016 -0400
@@ -11,7 +11,7 @@
 
 @LIST_OR_HIST@
 
-#set retmode, rettype = str($db.output_format).split('-')
+#set rettype, retmode = str($db.output_format).split('-')
 ## Otherwise, defaults to a None/empty which implies 'default' to NCBI
 #if retmode != "null":
 --retmode $retmode
@@ -35,7 +35,7 @@
   <tests>
     <test>
       <param name="db_select" value="taxonomy"/>
-      <param name="output_format" value="docsum-xml"/>
+      <param name="output_format" value="full-xml"/>
       <param name="qss" value="id_list"/>
       <param name="id_list" value="10239"/>
       <output name="default" file="viruses.tax.xml">