Mercurial > repos > iuc > multigps
changeset 10:bfe2da7083b7 draft
Uploaded
| author | iuc |
|---|---|
| date | Tue, 04 Apr 2017 15:23:30 -0400 |
| parents | 2e5d3c304171 |
| children | 5c2d5c0291ed |
| files | multigps.xml |
| diffstat | 1 files changed, 5 insertions(+), 5 deletions(-) [+] |
line wrap: on
line diff
--- a/multigps.xml Tue Apr 04 15:17:46 2017 -0400 +++ b/multigps.xml Tue Apr 04 15:23:30 2017 -0400 @@ -157,7 +157,7 @@ <configfile name="design_file"> <![CDATA[ #for cond_i, condition_items in enumerate($condition_repeat): - #for signal_items in condition_items['signal_repeat']: + #for signal_items in $condition_items['signal_repeat']: #set signal = $signal_items['signal'] #set replicate_name = $signal_items['replicate_name'] #set experiment_type = $signal['experiment_type'] @@ -165,7 +165,7 @@ #set fixedreadcount_cond = $signal_items['fixedreadcount_cond'] #set fixedreadcount_select = $fixedreadcount_cond['fixedreadcount_select'] #if str($fixedreadcount_select) == 'yes': - #set $line += + '\t' + str($fixedreadcount_cond['fixedreadcount']) + #set line = $line + '\t' + str($fixedreadcount_cond['fixedreadcount']) #end if '%s\n' % $line #end for @@ -176,13 +176,13 @@ #set specify_replicate_name_cond = $control_items['specify_replicate_name_cond'] #set specify_replicate_name = $specify_replicate_name_cond.specify_replicate_name #if str($specify_replicate_name) == 'yes': - #set $line += '\t' + str($specify_replicate_name_cond['replicate_name']) + #set line = $line + '\t' + str($specify_replicate_name_cond['replicate_name']) #end if - #set $line += '\t' + str($experiment_type) + #set line = $line + '\t' + str($experiment_type) #set fixedreadcount_cond = $control_items['fixedreadcount_cond'] #set fixedreadcount_select = $fixedreadcount_cond['fixedreadcount_select'] #if str($fixedreadcount_select) == 'yes': - #set $line += '\t' + str($fixedreadcount_cond['fixedreadcount']) + #set line = $line + '\t' + str($fixedreadcount_cond['fixedreadcount']) #end if '%s\n' % $line #end for