Mercurial > repos > iuc > mothur_summary_seqs
diff summary.seqs.xml @ 4:6082f78ea7cb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
| author | iuc |
|---|---|
| date | Tue, 20 Mar 2018 13:37:54 -0400 |
| parents | b7c0b62e024a |
| children |
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--- a/summary.seqs.xml Wed Feb 14 10:04:27 2018 -0500 +++ b/summary.seqs.xml Tue Mar 20 13:37:54 2018 -0400 @@ -32,6 +32,7 @@ <param name="fasta" type="data" format="fasta,mothur.align" label="fasta - Dataset"/> <param name="name" type="data" format="mothur.names" label="name - Names" optional="true"/> <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count_table" help="The count file is similar to the name file in that it is used to represent the number of duplicate sequences for a given representative sequence. "/> + <expand macro="param-savelog"/> </inputs> <outputs> <expand macro="logfile-output"/> @@ -41,18 +42,21 @@ <test> <param name="fasta" value="Mock_S280_L001_R1_001_small.trim.contigs.fasta"/> <output name="out_summary" file="Mock_S280_L001_R1_001_small.trim.contigs.summary" ftype="mothur.summary"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> <test><!-- test names input --> <param name="fasta" value="amazon.unique.fasta"/> <param name="name" value="amazon.names"/> <output name="out_summary" md5="b8a53926f64434291d232d2736da8293" ftype="mothur.summary"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> <test><!-- test count input --> <param name="fasta" value="amazon.unique.fasta"/> <param name="count" value="amazon.count_table"/> <output name="out_summary" md5="b8a53926f64434291d232d2736da8293" ftype="mothur.summary"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> </tests>
