Mercurial > repos > iuc > mothur_seq_error

diff seq.error.xml @ 4:165cd9cb3aff draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:47:08 -0400
parents 5aa51a579879
children 866820087837
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--- a/seq.error.xml	Wed Feb 14 09:58:46 2018 -0500
+++ b/seq.error.xml	Tue Mar 20 13:47:08 2018 -0400
@@ -78,6 +78,7 @@
         <param name="count" type="data" format="mothur.count_table" optional="true" label="count table"/>
         <param name="threshold" type="float" value="" min="0" max="1" optional="true" label="threshold - error rate at which to report (default 1.)"/>
         <param name="ignorechimeras" type="boolean" truevalue="true" falsevalue="false" checked="true" label="ignorechimeras - "/>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -129,6 +130,7 @@
             <output name="seq_forward_out" md5="92a24ef3155bc050ae4fd31bab43cf92"/>
             <output name="seq_reverse_out" md5="92a24ef3155bc050ae4fd31bab43cf92"/>
             <output name="summary_out" md5="04abbbd6aa82f084e4a3bd51c4ce98e6"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!--test with qual file and all outputs -->
@@ -150,6 +152,7 @@
             <output name="seq_forward_out" md5="dbcbbefdc83c2a7c045e3930850cdbd9"/>
             <output name="seq_reverse_out" md5="5618b1e431306ec1275f1572d6c0c2fc"/>
             <output name="summary_out" md5="d33bddf9b112f2f3a80b38cf7ac50e6a"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
     </tests>