Mercurial > repos > iuc > mothur_make_lefse

diff make.lefse.xml @ 5:4dfe3740f6d6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:30:17 -0400
parents e9cd4b205ddd
children 72367f588f5b
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line diff
--- a/make.lefse.xml	Wed Feb 14 11:41:40 2018 -0500
+++ b/make.lefse.xml	Tue Mar 20 13:30:17 2018 -0400
@@ -48,6 +48,7 @@
             <option value="averagegroup">averagegroup</option>
             <option value="averageotu">averageotu</option>
         </param>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -57,6 +58,7 @@
         <test><!-- test with shared file and defaults -->
             <param name="otu" value="amazon.an.shared" ftype="mothur.shared"/>
             <output name="lefse_out" md5="295633107cd983be73389e8b92164686" ftype="tabular"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with relabund file -->
@@ -64,6 +66,7 @@
             <param name="design" value="toymothur.design2" ftype="tabular"/>
             <param name="label" value="0.18"/>
             <output name="lefse_out" md5="c1e88702c6db198080c09f3b9c404c63" ftype="tabular"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
     </tests>