Mercurial > repos > iuc > jbrowse

diff test-data/bw/test.xml @ 40:d5e8d72c432a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 7be399c9ee10ecd4b076cc1df775f585c3eb0eeb
author iuc
date Wed, 01 Mar 2017 23:06:18 -0500
parents 318a0aa5075a
children c1451868f8d4
line wrap: on
line diff
--- a/test-data/bw/test.xml	Thu Feb 09 12:36:02 2017 -0500
+++ b/test-data/bw/test.xml	Wed Mar 01 23:06:18 2017 -0500
@@ -5,6 +5,17 @@
         <genomes>
             <genome>test-data/merlin.fa</genome>
         </genomes>
+        <general>
+            <defaultLocation></defaultLocation>
+            <trackPadding>40</trackPadding>
+            <shareLink>true</shareLink>
+            <aboutDescription></aboutDescription>
+            <show_tracklist>true</show_tracklist>
+            <show_nav>true</show_nav>
+            <show_overview>false</show_overview>
+            <show_menu>true</show_menu>
+            <hideGenomeOptions>false</hideGenomeOptions>
+        </general>
     </metadata>
     <tracks>
         <track cat="Scaling" format="wiggle">
@@ -20,6 +31,7 @@
                     <color_pos>__auto__</color_pos>
                     <color_neg>__auto__</color_neg>
                     <bicolor_pivot>zero</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>
@@ -36,6 +48,7 @@
                     <color_pos>__auto__</color_pos>
                     <color_neg>__auto__</color_neg>
                     <bicolor_pivot>zero</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>
@@ -54,6 +67,7 @@
                     <color_pos>__auto__</color_pos>
                     <color_neg>__auto__</color_neg>
                     <bicolor_pivot>zero</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>
@@ -74,6 +88,7 @@
                     <color_pos>__auto__</color_pos>
                     <color_neg>__auto__</color_neg>
                     <bicolor_pivot>mean</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>
@@ -91,6 +106,7 @@
                     <color_pos>#0000ff</color_pos>
                     <color_neg>#ff0000</color_neg>
                     <bicolor_pivot>mean</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>
@@ -108,6 +124,7 @@
                     <color_pos>#ff0000</color_pos>
                     <color_neg>#0000ff</color_neg>
                     <bicolor_pivot>mean</bicolor_pivot>
+                    <scale>log</scale>
                 </wiggle>
             </options>
         </track>
@@ -125,6 +142,7 @@
                     <color_pos>#0000ff</color_pos>
                     <color_neg>#ff0000</color_neg>
                     <bicolor_pivot>100</bicolor_pivot>
+                    <scale>linear</scale>
                 </wiggle>
             </options>
         </track>