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annotate test-data/bam/test.xml @ 16:318a0aa5075a draft

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author iuc
date Tue, 29 Dec 2015 15:31:54 -0500
parents
children d5e8d72c432a
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1 <?xml version="1.0"?>
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2 <root>
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3 <metadata>
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4 <gencode>11</gencode>
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5 <genomes>
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6 <genome>test-data/merlin.fa</genome>
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7 </genomes>
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8 </metadata>
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9 <tracks>
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10 <track cat="Default" format="pileup">
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11 <files>
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12 <trackFile path="test-data/bam/154.bam" ext="bam" label="Basic"/>
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13 </files>
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14 <options>
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15 <pileup>
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16 <auto_snp>false</auto_snp>
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17 <bam_indices>
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18 <bam_index>test-data/bam/154.bam.bai</bam_index>
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19 </bam_indices>
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20 </pileup>
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21 </options>
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22 </track>
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23 <track cat="Default" format="pileup">
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24 <files>
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25 <trackFile path="test-data/bam/154.bam" ext="bam" label="Auto-SNP"/>
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26 </files>
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27 <options>
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28 <pileup>
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29 <auto_snp>true</auto_snp>
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30 <bam_indices>
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31 <bam_index>test-data/bam/154.bam.bai</bam_index>
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32 </bam_indices>
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33 </pileup>
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34 </options>
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35 </track>
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36 </tracks>
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37 </root>