Mercurial > repos > iuc > infercnv

comparison test-data/gene_order.tabular @ 0:13d74ecaab08 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/infercnv commit 7e7abdef47fdf68f3ca69b75a8477dabc7bfa965
author iuc
date Tue, 23 Jul 2024 15:42:52 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:13d74ecaab08
1 WASH7P chr1 14404 29570
2 LINC00115 chr1 826206 827522
3 NOC2L chr1 944204 959309
4 MIR200A chr1 1167863 1167952
5 SDF4 chr1 1216908 1232031
6 UBE2J2 chr1 1253909 1273885
7 SCNN1D chr1 1280436 1292029
8 ACAP3 chr1 1292376 1309609
9 PUSL1 chr1 1308567 1311677
10 AURKAIP1 chr1 1373730 1375495
11 CCNL2 chr1 1385711 1399328
12 MRPL20 chr1 1401908 1407313
13 ANKRD65 chr1 1418420 1421769
14 ATAD3B chr1 1471769 1497848
15 SSU72 chr1 1541673 1574869
16 MMP23B chr1 1632095 1635263
17 SLC35E2B chr1 1659529 1692728
18 SLC35E2 chr1 1724838 1745992
19 GNB1 chr1 1785285 1891117
20 GABRD chr1 2019298 2030758
21 PRKCZ chr1 2050470 2185395
22 RER1 chr1 2391775 2405444
23 PEX10 chr1 2403964 2413797
24 PANK4 chr1 2508533 2526628
25 TNFRSF14 chr1 2555639 2565382
26 FAM213B chr1 2586491 2591469
27 WRAP73 chr1 3630767 3652761
28 LRRC47 chr1 3778558 3796504
29 DFFB chr1 3857267 3885429
30 C1orf174 chr1 3889125 3900293
31 MIR4417 chr1 5564071 5564143
32 RPL22 chr1 6181269 6209389
33 ICMT chr1 6221193 6235972
34 ACOT7 chr1 6264269 6394391
35 NOL9 chr1 6521347 6554535
36 KLHL21 chr1 6590724 6614607
37 PHF13 chr1 6613685 6624033
38 THAP3 chr1 6624866 6635586
39 DNAJC11 chr1 6634168 6701924
40 CAMTA1 chr1 6785324 7769706
41 VAMP3 chr1 7771269 7781432
42 PARK7 chr1 7954291 7985505
43 ERRFI1 chr1 8004404 8026308
44 SLC45A1 chr1 8317826 8344167
45 RERE chr1 8352397 8817643
46 ENO1 chr1 8861002 8879249
47 SLC2A5 chr1 9035107 9088478
48 SPSB1 chr1 9292880 9369532
49 CLSTN1 chr1 9729026 9824526
50 LZIC chr1 9922113 9943407
51 NMNAT1 chr1 9943428 9985501
52 UBE4B chr1 10032832 10181239
53 KIF1B chr1 10210805 10381603
54 PGD chr1 10398592 10420144
55 DFFA chr1 10456522 10472526
56 TARDBP chr1 11012344 11026420
57 SRM chr1 11054584 11060024
58 EXOSC10 chr1 11066618 11099881
59 MTOR chr1 11106535 11262507
60 UBIAD1 chr1 11273206 11296049
61 FBXO44 chr1 11654375 11663327
62 FBXO6 chr1 11664124 11674354
63 MAD2L2 chr1 11674480 11691650
64 AGTRAP chr1 11736084 11754802
65 CLCN6 chr1 11806096 11843144
66 NPPA chr1 11845709 11848345
67 RNU5E-1 chr1 11908152 11908271
68 PLOD1 chr1 11934205 11975538
69 MFN2 chr1 11980181 12013514
70 MIIP chr1 12019466 12032045
71 TNFRSF1B chr1 12167003 12209228
72 SNORA70 chr1 12221148 12221271
73 DHRS3 chr1 12567910 12617731
74 PRAMEF10 chr1 12892896 12898270
75 PDPN chr1 13583465 13617957
76 PRDM2 chr1 13700198 13825079
77 KAZN chr1 13892792 15118043
78 CASP9 chr1 15490832 15526534
79 DNAJC16 chr1 15526813 15592379
80 FBLIM1 chr1 15756607 15786594
81 SPEN chr1 15847864 15940460
82 ZBTB17 chr1 15941869 15976132
83 FBXO42 chr1 16246839 16352454
84 SZRD1 chr1 16352575 16398145
85 NECAP2 chr1 16440672 16460078
86 NBPF1 chr1 16562319 16613562
87 CROCCP2 chr1 16618253 16657232
88 MIR3675 chr1 16858949 16859021
89 SDHB chr1 17018722 17054170
90 PADI2 chr1 17066761 17119435
91 RCC2 chr1 17406760 17439724
92 ARHGEF10L chr1 17539835 17697874
93 IGSF21 chr1 18107746 18378483
94 UBR4 chr1 19074506 19210276
95 EMC1 chr1 19215664 19251552
96 MRTO4 chr1 19251539 19260128
97 AKR7A2 chr1 19303965 19312146
98 PQLC2 chr1 19312326 19329300
99 CAPZB chr1 19338776 19485539
100 MINOS1 chr1 19596977 19629821
101 TMCO4 chr1 19682213 19799945
102 VWA5B1 chr1 20290919 20354894
103 CAMK2N1 chr1 20482391 20486220
104 MUL1 chr1 20499448 20508161
105 DDOST chr1 20651767 20661544
106 HP1BP3 chr1 20742661 20787323
107 EIF4G3 chr1 20806292 21176888
108 RAP1GAP chr1 21596215 21669363
109 USP48 chr1 21678298 21783606
110 CELA3A chr1 22001656 22012539
111 LINC00339 chr1 22024558 22031223
112 CDC42 chr1 22052627 22092946
113 C1QA chr1 22636506 22639608
114 C1QC chr1 22643630 22648110
115 C1QB chr1 22652762 22661538
116 MIR4684 chr1 22719517 22719598
117 HNRNPR chr1 23303771 23344336
118 ZNF436 chr1 23359448 23369442
119 ASAP3 chr1 23428563 23484568
120 ID3 chr1 23557918 23559794
121 RPL11 chr1 23691779 23696425
122 PITHD1 chr1 23778405 23788232
123 LYPLA2 chr1 23790970 23795539
124 GALE chr1 23795599 23800804
125 HMGCL chr1 23801885 23838620
126 FUCA1 chr1 23845077 23868294
127 PNRC2 chr1 23959109 23963462
128 SRSF10 chr1 23964804 23980927
129 NIPAL3 chr1 24415794 24472976
130 SRRM1 chr1 24631716 24673267
131 CLIC4 chr1 24745357 24844324
132 SYF2 chr1 25222679 25232502
133 TMEM50A chr1 25337917 25362361
134 RHCE chr1 25362249 25430192
135 MTFR1L chr1 25818640 25832942
136 STMN1 chr1 25884181 25906991
137 PAFAH2 chr1 25959767 25998157
138 SCARNA17 chr1 26006006 26006130
139 PDIK1L chr1 26111165 26125543
140 ZNF593 chr1 26169871 26170873
141 CATSPER4 chr1 26190561 26202968
142 SH3BGRL3 chr1 26279176 26281522
143 DHDDS chr1 26432282 26471294
144 HMGN2 chr1 26472450 26475972
145 RPS6KA1 chr1 26529761 26575030
146 ARID1A chr1 26693236 26782104
147 PIGV chr1 26787472 26798398
148 GPN2 chr1 26876133 26890297
149 GPATCH3 chr1 26890488 26900466
150 NUDC chr1 26900238 26946862
151 TMEM222 chr1 27322145 27336400
152 GPR3 chr1 27392644 27395814
153 WASF2 chr1 27404226 27490158
154 IFI6 chr1 27666061 27672218
155 FAM76A chr1 27725979 27763122
156 STX12 chr1 27773183 27824452
157 THEMIS2 chr1 27872543 27886685
158 RPA2 chr1 27891524 27914746
159 EYA3 chr1 27970344 28088696
160 PTAFR chr1 28147166 28193936
161 DNAJC8 chr1 28199456 28233025
162 ATPIF1 chr1 28236109 28246906
163 SESN2 chr1 28259527 28282491
164 MED18 chr1 28329002 28335967
165 PHACTR4 chr1 28369582 28500369
166 RCC1 chr1 28505943 28539300
167 SNHG3 chr1 28505980 28510892
168 TRNAU1AP chr1 28553085 28578545
169 SNHG12 chr1 28578538 28582983
170 TAF12 chr1 28589323 28643085
171 RAB42 chr1 28592200 28595443
172 GMEB1 chr1 28668732 28719353
173 YTHDF2 chr1 28736621 28769775
174 OPRD1 chr1 28812142 28871267
175 SRSF4 chr1 29147743 29181987
176 MECR chr1 29192873 29230942
177 LAPTM5 chr1 30732469 30757820
178 SDC3 chr1 30869467 30908761
179 PUM1 chr1 30931506 31065991
180 SNRNP40 chr1 31259568 31296782
181 ZCCHC17 chr1 31296982 31364953
182 TINAGL1 chr1 31576485 31587686
183 PEF1 chr1 31629862 31644896
184 COL16A1 chr1 31652247 31704319
185 PTP4A2 chr1 31906421 31944856
186 KHDRBS1 chr1 32013829 32060850
187 TMEM39B chr1 32072031 32102866
188 KPNA6 chr1 32108038 32176568
189 TXLNA chr1 32179686 32198285
190 CCDC28B chr1 32200386 32205387
191 TMEM234 chr1 32214472 32222359
192 EIF3I chr1 32221928 32231604
193 MTMR9LP chr1 32231658 32241620
194 HDAC1 chr1 32292086 32333635
195 MARCKSL1 chr1 32333832 32336379
196 BSDC1 chr1 32365103 32394731
197 ZBTB8A chr1 32539427 32605939
198 ZBTB8OS chr1 32600172 32650903
199 RBBP4 chr1 32651142 32686211
200 KIAA1522 chr1 32741885 32774970
201 YARS chr1 32775237 32818153
202 S100PBP chr1 32816767 32858879
203 AK2 chr1 33007940 33080996
204 ZNF362 chr1 33256545 33300719
205 PHC2 chr1 33323623 33431052
206 SMIM12 chr1 34712737 34859816
207 GJB3 chr1 34781189 34786369
208 ZMYM1 chr1 35059786 35115859
209 SFPQ chr1 35176378 35193148
210 ZMYM4 chr1 35268967 35422058
211 KIAA0319L chr1 35433490 35557950
212 NCDN chr1 35557473 35567274
213 PSMB2 chr1 35599544 35641844
214 C1orf216 chr1 35713875 35719472
215 AGO3 chr1 35930718 36072500
216 ADPRHL2 chr1 36088875 36093932
217 COL8A2 chr1 36095236 36125220
218 TRAPPC3 chr1 36136570 36156053
219 THRAP3 chr1 36224416 36305357
220 LSM10 chr1 36391238 36397892
221 MRPS15 chr1 36455718 36464437
222 CSF3R chr1 36466043 36483278
223 GRIK3 chr1 36795527 37034129
224 MEAF6 chr1 37492575 37514774
225 SNIP1 chr1 37534449 37554344
226 GNL2 chr1 37566816 37595935
227 C1orf109 chr1 37681570 37692249
228 MANEAL chr1 37793802 37801137
229 C1orf122 chr1 37806979 37809454
230 INPP5B chr1 37860697 37947057
231 SNORA63 chr1 37884237 37884317
232 SF3A3 chr1 37956975 37990921
233 FHL3 chr1 37996770 38005606
234 RRAGC chr1 38838198 38859823
235 AKIRIN1 chr1 38991223 39006059
236 NDUFS5 chr1 39026318 39034636
237 MACF1 chr1 39081316 39487177
238 PPIEL chr1 39531838 39558707
239 PABPC4 chr1 39560816 39576790
240 PPIE chr1 39692182 39763914
241 BMP8B chr1 39757182 39788861
242 TRIT1 chr1 39841022 39883511
243 CAP1 chr1 40040233 40072649
244 PPT1 chr1 40071461 40097727
245 RLF chr1 40161373 40240921
246 ZMPSTE24 chr1 40258107 40294184
247 COL9A2 chr1 40300487 40317816
248 SMAP2 chr1 40344850 40423326
249 NFYC chr1 40691648 40771603
250 CITED4 chr1 40861051 40862366
251 CTPS1 chr1 40979335 41012565
252 SCMH1 chr1 41027200 41242154
253 FOXJ3 chr1 42176539 42335877
254 ZMYND12 chr1 42430329 42456267
255 PPIH chr1 42658425 42676758
256 YBX1 chr1 42682427 42702349
257 C1orf50 chr1 42767269 42775747
258 ZNF691 chr1 42846573 42852477
259 SLC2A1 chr1 42925375 42959173
260 EBNA1BP2 chr1 43164175 43270936
261 TMEM125 chr1 43269994 43274002
262 CDC20 chr1 43358955 43363203
263 ELOVL1 chr1 43363397 43368074
264 MED8 chr1 43383917 43389808
265 SZT2 chr1 43389882 43454247
266 HYI chr1 43451003 43453989
267 KDM4A chr1 43650158 43705515
268 IPO13 chr1 43946939 43968022
269 DPH2 chr1 43970000 43973369
270 ATP6V0B chr1 43974487 43978295
271 SLC6A9 chr1 43991500 44031467
272 DMAP1 chr1 44213455 44220681
273 ERI3 chr1 44221070 44355260
274 RNF220 chr1 44405194 44651724
275 MIR5584 chr1 44545493 44545552
276 TMEM53 chr1 44635238 44674555
277 RPS8 chr1 44775251 44778779
278 SNORD38B chr1 44778390 44778458
279 PLK3 chr1 44800225 44805990
280 EIF2B3 chr1 44850522 44986722
281 HECTD3 chr1 45002540 45011329
282 UROD chr1 45012147 45015575
283 HPDL chr1 45326905 45328533
284 MUTYH chr1 45329163 45340470
285 TOE1 chr1 45339670 45343975
286 PRDX1 chr1 45511036 45523047
287 AKR1A1 chr1 45550543 45570049
288 NASP chr1 45583846 45618904
289 GPBP1L1 chr1 45627304 45688113
290 TMEM69 chr1 45687214 45694443
291 IPP chr1 45694324 45750650
292 PIK3R3 chr1 46040140 46133036
293 POMGNT1 chr1 46188682 46220305
294 LRRC41 chr1 46261196 46303608
295 UQCRH chr1 46303631 46316776
296 NSUN4 chr1 46340177 46365152
297 FAAH chr1 46394265 46413848
298 MKNK1 chr1 46557408 46616843
299 ATPAF1 chr1 46632737 46673867
300 EFCAB14 chr1 46675159 46719064
301 PDZK1IP1 chr1 47183593 47191044
302 CMPK1 chr1 47333797 47378839
303 SPATA6 chr1 48295372 48472208
304 BEND5 chr1 48727523 48776969
305 ELAVL4 chr1 50048014 50203786
306 CDKN2C chr1 50960745 50974633
307 RNF11 chr1 51236271 51273455
308 EPS15 chr1 51354263 51519328
309 OSBPL9 chr1 51577179 51798427
310 TXNDC12 chr1 52020131 52056171
311 KTI12 chr1 52032103 52033816
312 BTF3L4 chr1 52056125 52090716
313 ZFYVE9 chr1 52142094 52346686
314 ORC1 chr1 52372829 52404459
315 PRPF38A chr1 52404564 52420839
316 ZCCHC11 chr1 52408282 52553487
317 GPX7 chr1 52602372 52609051
318 ZYG11B chr1 52726467 52827342
319 SCP2 chr1 52927229 53051703
320 MIR5095 chr1 52934930 52935017
321 CPT2 chr1 53196429 53214197
322 C1orf123 chr1 53214099 53220617
323 MAGOH chr1 53226892 53238610
324 LRP8 chr1 53242364 53328070
325 YIPF1 chr1 53851719 53889834
326 HSPB11 chr1 53916574 53945929
327 LRRC42 chr1 53946077 53968168
328 TMEM59 chr1 54026681 54053504
329 MRPL37 chr1 54184041 54225464
330 TTC4 chr1 54715822 54742657
331 DHCR24 chr1 54849633 54887218
332 TMEM61 chr1 54980792 54992293
333 USP24 chr1 55066359 55215113
334 DAB1 chr1 56994778 58546734
335 OMA1 chr1 58415384 58546802
336 JUN chr1 58780788 58784327
337 NFIA chr1 60865259 61462793
338 TM2D1 chr1 61681046 61725423
339 USP1 chr1 62436297 62451804
340 ATG4C chr1 62784135 62865513
341 FOXD3 chr1 63323041 63325126
342 ALG6 chr1 63367590 63438562
343 ITGB3BP chr1 63440770 63593721
344 EFCAB7 chr1 63523372 63572693
345 PGM1 chr1 63593276 63660245
346 RAVER2 chr1 64745095 64833232
347 JAK1 chr1 64833229 64966504
348 AK4 chr1 65147549 65232145
349 DNAJC6 chr1 65248219 65415869
350 LEPROT chr1 65420587 65436007
351 PDE4B chr1 65792514 66374579
352 MIR3117 chr1 66628440 66628517
353 MIER1 chr1 66924895 66988619
354 SERBP1 chr1 67407810 67430415
355 GADD45A chr1 67685061 67688338
356 WLS chr1 68098473 68233120
357 LRRC40 chr1 70144805 70205620
358 SRSF11 chr1 70205682 70253052
359 ANKRD13C chr1 70260588 70354734
360 HHLA3 chr1 70354805 70385339
361 CTH chr1 70411218 70439851
362 ZRANB2 chr1 71063291 71081297
363 NEGR1 chr1 71395940 72282734
364 CRYZ chr1 74705482 74733408
365 TYW3 chr1 74733152 74766678
366 SLC44A5 chr1 75202131 75611116
367 ACADM chr1 75724347 75787575
368 RABGGTB chr1 75786197 75795079
369 ST6GALNAC3 chr1 76074719 76634601
370 PIGK chr1 77088990 77219430
371 AK5 chr1 77282051 77559969
372 ZZZ3 chr1 77562416 77683419
373 USP33 chr1 77695987 77759852
374 FUBP1 chr1 77944055 77979110
375 DNAJB4 chr1 77979175 78017964
376 IFI44L chr1 78619922 78646145
377 IFI44 chr1 78649796 78664078
378 TTLL7 chr1 83865028 83999150
379 PRKACB chr1 84078062 84238498
380 RPF1 chr1 84479259 84497790
381 GNG5 chr1 84498325 84506565
382 C1orf52 chr1 85249953 85259672
383 BCL10 chr1 85266248 85277090
384 DDAH1 chr1 85318481 85578363
385 ZNHIT6 chr1 85649423 85708433
386 ODF2L chr1 86346824 86396342
387 CLCA4 chr1 86547078 86580754
388 SH3GLB1 chr1 86704570 86748184
389 PKN2 chr1 88684222 88836255
390 GTF2B chr1 88852932 88891944
391 RBMXL1 chr1 88979456 88992960
392 GBP3 chr1 89006666 89022894
393 LRRC8D chr1 89821014 89936611
394 ZNF326 chr1 89995112 90035531
395 ZNF644 chr1 90915298 91022272