Mercurial > repos > iuc > imagej2_analyze_particles_binary
changeset 1:dd9041dc3c27 draft
planemo upload commit 378c3ecfbaed0330faf197811d379431b0f9e92c-dirty
| author | iuc |
|---|---|
| date | Sun, 11 Oct 2015 13:29:46 -0400 |
| parents | d065ec177dcd |
| children | d087c38330c8 |
| files | imagej2_analyze_particles_binary.xml imagej2_base_utils.py imagej2_macros.xml |
| diffstat | 3 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/imagej2_analyze_particles_binary.xml Wed Aug 26 14:36:17 2015 -0400 +++ b/imagej2_analyze_particles_binary.xml Sun Oct 11 13:29:46 2015 -0400 @@ -1,6 +1,6 @@ <?xml version='1.0' encoding='UTF-8'?> <tool id="imagej2_analyze_particles_binary" name="Analyze particles" version="@WRAPPER_VERSION@.0"> - <description>of binary image with ImageJ2</description> + <description>of binary image</description> <macros> <import>imagej2_macros.xml</import> </macros>
--- a/imagej2_base_utils.py Wed Aug 26 14:36:17 2015 -0400 +++ b/imagej2_base_utils.py Sun Oct 11 13:29:46 2015 -0400 @@ -154,7 +154,7 @@ return ' None' else: if val_type == 'float': - return ' %.1f' % val + return ' %.3f' % val elif val_type == 'int': return ' %d' % val return ' %s' % val
--- a/imagej2_macros.xml Wed Aug 26 14:36:17 2015 -0400 +++ b/imagej2_macros.xml Sun Oct 11 13:29:46 2015 -0400 @@ -73,7 +73,7 @@ before they are analyzed. This step is performed using the ImageJ2 **Make Binary** command with the following settings: **Iterations:** 1, **Count:** 1, **Pad edges when eroding:** No. The tool allows you to choose the **Black background** setting. If these settings are not appropriate, -first manually convert the image to binary using the **Convert to binary (black and white) with ImageJ2** +first manually convert the image to binary using the **Convert to binary (black and white)** tool, which allows you to change them. </token> <xml name="image_datatypes">