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changeset 6:6df301084f6e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit 76e13c1c8e301d6f2a52ad7b79e69fcb5fb3479a
author iuc
date Wed, 04 May 2016 17:50:15 -0400
parents 67e9ee942e54
children 8979161ef72c
files hisat2.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/hisat2.xml	Wed Apr 13 16:38:16 2016 -0400
+++ b/hisat2.xml	Wed May 04 17:50:15 2016 -0400
@@ -19,7 +19,7 @@
         <![CDATA[
         #if str($spliced_options.spliced_options_selector) == "advanced" and str($spliced_options.known_splice_gtf) != 'None':
             ln -s "${spliced_options.known_splice_gtf}" splice_sites.gtf &&
-            extract_splice_sites.py splice_sites.gtf > splice_sites.txt &&
+            hisat2_extract_splice_sites.py splice_sites.gtf > splice_sites.txt &&
         #end if
         #if $reference_genome.reference_genome_source == "history":
             ln -s "$reference_genome.history_item" genome.fa &&