# HG changeset patch
# User iuc
# Date 1462398615 14400
# Node ID 6df301084f6e1e6911d7da4f977a223d975803c0
# Parent  67e9ee942e54a103bd48f38e9a621c8bb303c012
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit 76e13c1c8e301d6f2a52ad7b79e69fcb5fb3479a

diff -r 67e9ee942e54 -r 6df301084f6e hisat2.xml
--- a/hisat2.xml	Wed Apr 13 16:38:16 2016 -0400
+++ b/hisat2.xml	Wed May 04 17:50:15 2016 -0400
@@ -19,7 +19,7 @@
         <![CDATA[
         #if str($spliced_options.spliced_options_selector) == "advanced" and str($spliced_options.known_splice_gtf) != 'None':
             ln -s "${spliced_options.known_splice_gtf}" splice_sites.gtf &&
-            extract_splice_sites.py splice_sites.gtf > splice_sites.txt &&
+            hisat2_extract_splice_sites.py splice_sites.gtf > splice_sites.txt &&
         #end if
         #if $reference_genome.reference_genome_source == "history":
             ln -s "$reference_genome.history_item" genome.fa &&