changeset 9:dcd45d06c8f1 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 843a94f53c808d098def353b0bc5f7f554d9e1af
author iuc
date Fri, 09 Dec 2022 22:40:05 +0000
parents 668c481943f4
children 71611c2391c1
files ggplot_histogram.xml macros.xml test-data/ggplot_histogram_result1.pdf test-data/ggplot_line_result1.pdf test-data/ggplot_pca_result1.pdf test-data/ggplot_point_result1.pdf test-data/ggplot_point_result2.pdf test-data/ggplot_point_result3.pdf test-data/ggplot_violin_result1.pdf
diffstat 9 files changed, 25 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/ggplot_histogram.xml	Tue Nov 23 07:55:20 2021 +0000
+++ b/ggplot_histogram.xml	Fri Dec 09 22:40:05 2022 +0000
@@ -5,7 +5,7 @@
     </macros>
     <expand macro="requirements">
         <requirement type="package" version="1.4.4">r-reshape2</requirement>
-        <requirement type="package" version="2.0.0">r-svglite</requirement>
+        <requirement type="package" version="2.1.0">r-svglite</requirement>
     </expand>
     <command detect_errors="exit_code"><![CDATA[
 cat '$script' &&
--- a/macros.xml	Tue Nov 23 07:55:20 2021 +0000
+++ b/macros.xml	Fri Dec 09 22:40:05 2022 +0000
@@ -12,10 +12,9 @@
             <xref type="bio.tools">ggplot2</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">3.3.5</token>
+    <token name="@TOOL_VERSION@">3.4.0</token>
     <token name="@VERSION_SUFFIX@">0</token>
 
-
     <token name="@R_INIT@"><![CDATA[
         ## Setup R error handling to go to stderr
         options(show.error.messages=F, error=function(){cat(geterrmessage(), file=stderr()); q("no",1,F)})
@@ -318,6 +317,29 @@
                     <option value="grey">Grey</option>
                     <option value="gold">Gold</option>
                 </param>
+                <param name="shape" type="select" label="Shape of data points" >
+                    <option value="0">square</option>
+                    <option value="1">circle</option>
+                    <option value="2">triangle point up</option>
+                    <option value="3">plus</option>
+                    <option value="4">cross</option>
+                    <option value="5">diamond</option>
+                    <option value="6">triangle point down</option>
+                    <option value="7">square cross</option>
+                    <option value="8">star</option>
+                    <option value="9">diamond plus</option>
+                    <option value="10">circle plus</option>
+                    <option value="11">triangles up and down</option>
+                    <option value="12">square plus</option>
+                    <option value="13">circle cross</option>
+                    <option value="14">square and triangle down</option>
+                    <option value="15">filled square</option>
+                    <option value="16">filled circle</option>
+                    <option value="17">filled triangle point-up</option>
+                    <option value="18">filled diamond</option>
+                    <option value="19">solid circle</option>
+                    <option value="20">bullet (smaller circle)</option>
+                </param>
             </when>
         </conditional>
     </xml>
Binary file test-data/ggplot_histogram_result1.pdf has changed
Binary file test-data/ggplot_line_result1.pdf has changed
Binary file test-data/ggplot_pca_result1.pdf has changed
Binary file test-data/ggplot_point_result1.pdf has changed
Binary file test-data/ggplot_point_result2.pdf has changed
Binary file test-data/ggplot_point_result3.pdf has changed
Binary file test-data/ggplot_violin_result1.pdf has changed