Mercurial > repos > iuc > gemini_interactions

diff gemini_interactions.xml @ 3:d3b3668b0ef2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit e4dce25c8dbeffca62c402f74ca733ddc7a6091b
author iuc
date Fri, 07 Dec 2018 12:54:04 -0500
parents 0c020ebf6c65
children dd4dc1941e96
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line diff
--- a/gemini_interactions.xml	Tue Feb 16 05:52:18 2016 -0500
+++ b/gemini_interactions.xml	Fri Dec 07 12:54:04 2018 -0500
@@ -1,4 +1,4 @@
-<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0">
+<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
     <description>Find genes among variants that are interacting partners</description>
     <macros>
         <import>gemini_macros.xml</import>
@@ -9,11 +9,9 @@
     <expand macro="version_command" />
     <command>
 <![CDATA[
+        @PROVIDE_ANNO_DATA@
+
         gemini
-            #if $annotation_databases:
-                --annotation-dir "${annotation_databases.fields.path}"
-            #end if
-
             #if $gene.gene_selector == 'lof':
                 ## lof interactions is a separate program
                 lof_interactions