Mercurial > repos > iuc > enasearch_retrieve_analysis_report

annotate enasearch_retrieve_analysis_report.xml @ 0:bf57e6df737e draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
author iuc
date Tue, 29 Aug 2017 04:10:02 -0400
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children 2a7259e4d913
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bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
iuc
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1 <tool id="enasearch_retrieve_analysis_report" name="Retrieve an analysis report" version="@WRAPPER_VERSION@.0">
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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2 <description></description>
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3 <macros>
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4 <import>macros.xml</import>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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5 <import>search_macros.xml</import>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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6 </macros>
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7 <expand macro="requirements"/>
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8 <expand macro="version"/>
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9 <command detect_errors="aggressive"><![CDATA[
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10 enasearch
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11 retrieve_analysis_report
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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12 --accession '$accession'
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13 @FIELDS@
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14 --file '$output'
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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15 ]]></command>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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16 <inputs>
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17 <expand macro="accession"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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18 <param argument="--fields" type="select" optional="true" multiple="true" label="Fields to return">
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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19 <expand macro="analysis_fields"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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20 </param>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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21 </inputs>
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22 <outputs>
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23 <data name="output" format="tabular" label="${tool.name} on ${accession}"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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24 </outputs>
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25 <tests>
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26 <test>
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27 <param name="accession" value="ERZ009929"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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28 <output name="output" md5="cfcb3fb4db26e039f12f36eaa7519871"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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29 </test>
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30 <test>
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31 <param name="accession" value="ERZ009929"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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32 <param name="fields" value="analysis_accession"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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33 <output name="output" md5="7249f93fac05d1e6746a076e1ae445b5"/>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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34 </test>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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35 <test>
bf57e6df737e planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
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36 <param name="accession" value="ERZ009929"/>
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37 <param name="fields" value="analysis_accession,sample_accession,scientific_name"/>
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38 <output name="output" md5="af4ba9b125b27525979ab6ea6a2b3637"/>
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39 </test>
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40 </tests>
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41 <help><![CDATA[
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42 **What it does**
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43
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44 This tool retrieve an analysis report for an accession id
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45 ]]></help>
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46 <expand macro="citations"/>
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47 </tool>