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annotate macros.xml @ 2:604bf9c9294f draft default tip

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planemo upload for repository https://github.com/paulzierep/DeepMicro commit 574cb8c241e18a15f006bf307235c7dd23f07c69
author iuc
date Tue, 23 Jul 2024 15:56:26 +0000
parents 5fc85e6bdc19
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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1 <?xml version="1.0"?>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
iuc
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2 <macros>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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3 <token name="@TOOL_VERSION@">1.4</token>
2
604bf9c9294f planemo upload for repository https://github.com/paulzierep/DeepMicro commit 574cb8c241e18a15f006bf307235c7dd23f07c69
iuc
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4 <token name="@VERSION_SUFFIX@">2</token>
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969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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5 <token name="@PROFILE@">22.05</token>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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6 <xml name="biotools">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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7 <xrefs>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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8 <xref type="bio.tools">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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9 DeepMicro
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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10 </xref>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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11 </xrefs>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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12 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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13 <xml name="requirements">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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14 <requirements>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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15 <requirement type="package" version="@TOOL_VERSION@">deepmicro</requirement>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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16 </requirements>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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17 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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18 <xml name="version">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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19 <version_command><![CDATA[
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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20 echo "@TOOL_VERSION@"
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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21 ]]></version_command>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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22 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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23 <xml name="citations">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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24 <citations>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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25 <citation type="doi">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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26 10.1038/s41598-020-63159-5
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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27 </citation>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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28 </citations>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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29 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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30 <xml name="creator">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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31 <creator>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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32 <person givenName="Paul" familyName="Zierep" email="zierep@informatik.uni-freiburg.de" />
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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33 </creator>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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34 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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35 <xml name="dm">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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36 <param name="dm" type="text" value="40" label="Dimensions for deep representation learning" help="Comma-separated dimensions for deep representation learning e.g. [50,30,20]">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
iuc
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37 <validator type="regex" message="Use only numbers and commas for this input">^(\d+|\,)+$</validator>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
iuc
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38 </param >
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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39
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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40 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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41 <xml name="clfs">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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42 <param name="classifier" type="select" label="Classifier for the cross validation" help="The classifier used for the cross validation (`all` will create a run for each classifier)">
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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43 <option value="svm">svm</option>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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44 <option value="mlp">mlp</option>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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45 <option value="rf">rf</option>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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46 <option value="all">all</option>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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47 </param>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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48 </xml>
969ca45fd5de planemo upload for repository https://github.com/paulzierep/DeepMicro commit 1bbea291a9d77beafaeba83ab775d870ec24719e
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49 </macros>