Mercurial > repos > iuc > cnvkit_heatmap

changeset 2:10ff342adcbe draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cnvkit commit 9d922676808c5f57e9c01b148eec6cc0a63c53e5
author iuc
date Fri, 13 Dec 2024 23:51:08 +0000
parents bed0e5074cc0
children 690231d77e3f
files heatmap.xml macros.xml
diffstat 2 files changed, 12 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/heatmap.xml	Fri Sep 29 15:34:21 2023 +0000
+++ b/heatmap.xml	Fri Dec 13 23:51:08 2024 +0000
@@ -55,17 +55,21 @@
     <tests>
         <test expect_num_outputs="1">
             <param name="filenames" ftype="tabular" value="tumor.cns,sample.cns" />
-            <param name="desaturate" value="1" />
+            <section name="advanced_settings">
+                <param name="desaturate" value="1" />
+            </section>
             <output name="out_heatmap_png" file="sample-heatmap.png" ftype="png" compare="sim_size" >
                 <assert_contents><has_size value="9000" delta="5000" /></assert_contents>
             </output> 
         </test>
         <test expect_num_outputs="1">
-            <conditional name="Sample_sex">
-                <param name="sex" value="no" />
-            </conditional>
             <param name="filenames" ftype="tabular" value="tumor.cns,sample.cns" />
-            <param name="desaturate" value="1" />
+            <section name="advanced_settings">
+                <param name="desaturate" value="1" />
+                <conditional name="Sample_sex">
+                    <param name="sex" value="no" />
+                </conditional>
+            </section>
             <output name="out_heatmap_png" file="sample-heatmap.png" ftype="png" compare="sim_size" >
                 <assert_contents><has_size value="9000" delta="5000" /></assert_contents>
             </output> 
--- a/macros.xml	Fri Sep 29 15:34:21 2023 +0000
+++ b/macros.xml	Fri Dec 13 23:51:08 2024 +0000
@@ -1,10 +1,10 @@
 <macros>
-    <token name="@VERSION_SUFFIX@">0.1</token>
-    <token name="@TOOL_VERSION@">0.9.10</token>
+    <token name="@VERSION_SUFFIX@">1</token>
+    <token name="@TOOL_VERSION@">0.9.11</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@TOOL_VERSION@">cnvkit</requirement>
-            <requirement type="package" version="1.0.2">scikit-learn</requirement>
+            <requirement type="package" version="1.4.2">scikit-learn</requirement>
         </requirements>
     </xml>
     <xml name="reference_interface">