Mercurial > repos > iuc > bcftools_concat

diff bcftools_concat.xml @ 5:d235ff3501fd draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
author: iuc
date: Thu, 13 Apr 2017 16:26:01 -0400
parents: 21f4a914f1aa
children: d1ea6dede900
--- a/bcftools_concat.xml	Sat Mar 11 17:50:07 2017 -0500
+++ b/bcftools_concat.xml	Thu Apr 13 16:26:01 2017 -0400
@@ -10,6 +10,9 @@
     <command detect_errors="aggressive"><![CDATA[
 @PREPARE_ENV@
 @PREPARE_INPUT_FILES@
+#set $section = $sec_restrict
+@PREPARE_REGIONS_FILE@
+
 bcftools @EXECUTABLE@
 
 ## Default section
@@ -35,7 +38,7 @@
 
 ## Primary Input/Outputs
 @INPUT_FILES@ 
-> "$output_file"
+> '$output_file'
 ]]>
     </command>
     <inputs>