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comparison bcftools_concat.xml @ 5:d235ff3501fd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
author iuc
date Thu, 13 Apr 2017 16:26:01 -0400
parents 21f4a914f1aa
children d1ea6dede900
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4:21f4a914f1aa 5:d235ff3501fd
8 <expand macro="requirements" /> 8 <expand macro="requirements" />
9 <expand macro="version_command" /> 9 <expand macro="version_command" />
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 @PREPARE_ENV@ 11 @PREPARE_ENV@
12 @PREPARE_INPUT_FILES@ 12 @PREPARE_INPUT_FILES@
13 #set $section = $sec_restrict
14 @PREPARE_REGIONS_FILE@
15
13 bcftools @EXECUTABLE@ 16 bcftools @EXECUTABLE@
14 17
15 ## Default section 18 ## Default section
16 #set $section = $sec_default 19 #set $section = $sec_default
17 20
33 @OUTPUT_TYPE@ 36 @OUTPUT_TYPE@
34 @THREADS@ 37 @THREADS@
35 38
36 ## Primary Input/Outputs 39 ## Primary Input/Outputs
37 @INPUT_FILES@ 40 @INPUT_FILES@
38 > "$output_file" 41 > '$output_file'
39 ]]> 42 ]]>
40 </command> 43 </command>
41 <inputs> 44 <inputs>
42 <expand macro="macro_inputs" /> 45 <expand macro="macro_inputs" />
43 <section name="sec_restrict" expanded="false" title="Restrict to"> 46 <section name="sec_restrict" expanded="false" title="Restrict to">