Mercurial > repos > iuc > amplican

annotate test-data/RunParameters.txt @ 0:a0b7d39c96da draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
author iuc
date Wed, 22 Sep 2021 21:01:06 +0000
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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1 Config file: /tmp/tmpg3fcuksp/files/f/0/2/dataset_f0207835-503b-4340-b985-c28af77332e6.dat
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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2 Average Quality: 0
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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3 Minimum Quality: 20
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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4 Write Alignments: txt
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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5 Fastq files Mode: 0
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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6 Gap Opening: 25
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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7 Gap Extension: 0
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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8 Consensus: TRUE
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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9 Normalize: guideRNA, Group
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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10 PRIMER DIMER buffer: 30
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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11 Cut buffer: 5
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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12 Scoring Matrix:
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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13 ,A,C,G,T
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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14 A,5,-4,-4,-4
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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15 C,-4,5,-4,-4
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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16 G,-4,-4,5,-4
a0b7d39c96da "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/amplican commit 48a91cdf44f4d7e332b852bb2ced6cd180147fdc"
iuc
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17 T,-4,-4,-4,5