Mercurial > repos > iracooke > protk_proteogenomics
view test-data/augustus_sample.fasta @ 0:956bfab63005 draft default tip
planemo upload for repository https://github.com/iracooke/protk-galaxytools/blob/master/protk-proteogenomics/.shed.yml commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
author | iracooke |
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date | Tue, 20 Oct 2015 20:36:03 -0400 |
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>lcl|scaffold14_rev_g1.t1 2517|3803 MAGLAAGIVGVVSAGTKVAIVLSQYGNEVGAAGQEARMIASEIRGSCTVLTTLHSTLKHVQTSPYYANCAELISDMTDASLEMYTEIMEVVEGLSAMTSDSKMNLRKRLLWTFQKPKIVMLRTALEAYRSNLALMLGTLDMAEKASRSYVALTEEIVQEDEMDCAKLQDLQLEQQMSLLKVQELDPESIELPPSPTGAGRGFWGSSNKESAFPVEEGYVSALREEIATLKRSRTVYLTDPEKVRDRVARQSNRLSQLLVQDQRRISRRWSQSLPERRMSMYSDLAAERSRSPTSTPGSSSASPSESSDDLSSDYAQVNEPMVRDFYAWMSAQTGVQRSIVLRQLQARFGDGRGTTVRKPVNGVGIHPGASEDTLCADVSKLELEKDAVAAETYERQAEPAPVVGASKEKKSSFLKRSMGLKRRTPSAS >lcl|scaffold14_rev_g2.t1 6798|7541 MPTRLSNTRKHRGHVSAGHGRVGKQYVTPLSNPLLDVERIFQFSPLHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGNHFWKPTINLDKLWSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG >lcl|scaffold14_rev_g2.t2 6798|7541 MPTRLSNTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGNHFWKPTINLDKLWSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG >lcl|scaffold14_fwd_g3.t1 8211|8576 MSKQLSTKEVSTHKSVEEGLWIIIDNEVYDVTKFIEEHPGGPKILKRVGGKDASKQFWKASNPIPLQPSHQKHPLSHPLPSSVLIGARVLTLSASQYHSDNVLKKYKPKLMIGSVKEDAKL >lcl|scaffold14_rev_g4.t1 9661|12081 METYQGKVQTPQDAIILFEACRLGLTPRVQRRLSEKERQQIKSGSVFVWDEREAGMRRWTDGKSWSASRVSGSFLTYREMEGKRGGTGLPAGATPPALRKSSSGTRSSANSNNGGSEDDEEGPDGYKYKADGLMKQSFSITTSDGRHLHLISYFARNPAHPLKQPSTDPQLRNIVPQKGMYPEATVNEATNIPPVTRGPMGGTSPHPPAHPPPQMYVAAYPFPPPPGYQAGPMHHHYPPQGWPPSPGHLGPGGVPPGAFYYPAPPPGYVYPNSPYAPSPYPYGHPPPHAQERGPPPPPQSSLPPLSGPIHPSAGQWAPPAARTSSATYAQSRPPTSLQESYSRSAAEQRQEETSRAPGPQLAPVVAFQNKPPTPPESRNGATPPAKSYPTDPLPTRETNTTTGPTKTFPSIKALINGDVITSRREEDRTRTRSRSRSPLGSRIRDVPSAMAAGGRERDRSDLKRLDAQLLKSSGLESSDGNGKLAQNHPGAHSKPISRSIDVIAKVIPGHVLATMPENIELEPQDFGRWPLQSGNGRYTEIQPTPTSSEDGQKLQLQTMPDDNFGRVMEPSLKEVLDGMTGRQRGLGQLGQMRLTTQDVNSKRFDLYQALKYATPSSTITRILNELKTGVLPSEKLLRETNIGVEVDGLRWLTKIPVIAKLSTEIVNEWRTVIESGPRPHPSNDEIFGPYWRLSNNFYVSNHGSESPFPRLSLGNEKLGLGSLNDNKNLGTENGMIPKTKEDRL >lcl|scaffold14_fwd_g5.t1 11112|11486 MYAQLEGPIAQQRDVSGHSEGADLIEAAEVDLSPARAEEGGHTDMGMARMVNSDKHIPEEEQDNKMLQVVLLQGLDVPGLAASLVEGSDDALVLLGILEAVEMDRLRRTSVEADAQEDAAMSPP >lcl|scaffold14_fwd_g6.t1 22383|25038 MLIRSNPSLHYPITITKLLAKPDQSVDRFAPLFSYTYKTTVTEGNKYGDEPIQFQKDFPAEFQSELEGTLRVWKIKPGDVLYESGIQLVDIDEPCTHDTVFGGLCANCGQEMDKLDNYLTTERASQRATVFASHGNTALLVSKKEAGRINEEAKRRLLQGRKLSLVVDLDQTIIHATVDPTVAEWQQDPANPNYEAVKGVRQFQLVDDGPGGRGCNYYIKLRPGLEEFLEDIAKKYELHIYTMGTRAYAQKIAEIVDPQRRFFGDRILSRDESGSLTNKTLQRIFPVDTDMVVIIDDRGDVWQWSPNLIKVTPYDFFVGIGDINSSFLPKKTDSISKRTRTPPPPPPPAEIPEDKETNDSFEEAESPTNGLAIDTTVILEDSDAPTLETQLVAMAGGDDPSIIEEKSNTQAETLAAQVTDRPLMKKQEMLDKLDEEEEAKENSEEERPVETTPDTKQRHNLLHDDDDELRHLQANLESIHRLFYEEYDQNIIASPPRLSQLRGERSAKKTPVDNLELVPDVKDIMPRMKLDVLKHVVICFTGVIPQGLNHETSDIGMWARSFGARVSPNLTKSTTHVVAHKDRRTSKVRQAARHPNIKIVATSWLLECFVQWVAAPEGPHTIKVESDEHDAHDSLPFEELEEASMLTPSEDGGADDAVLPSEVEEADEEPNSPVLDILENVEWGDLEDEMKDFYDSEDETEAEDTDEGHDEGMESDASGKSGRSSRSTSSRKAKRKRRTESVNGDYEEAGESTSALQKRRKMAAERTTGLANVETLENPSGLPSPDTTGPEEEAGEKDKGLSNGAEGDVSDDIDEFEKDMMAMFDKDSDAED >lcl|scaffold14_fwd_g7.t1 25584|27469 MTTDNPEAKMVEVAQPTKMAVVPVEKEVPKRPSKLRFMDLSVDIKTLIVSHVHRPTELKNLCLTCSQMHKITVRKLYHEVTLEVGSSTDAKLTSFINPRNIGLPHIRKLDLYLAEVADKCNQLQQAHFAIRMILEFLPENILEKFSWHPWSPFLADNLVLLYKKQRRMEWLEGIALDRNVLPELEKQSDFDQIFTRTRRLGLYPDSRDVLNFCANLIKRTKKVEKITLHASFDEDSDRTPIPSRELNDSSTDLGLITRTMFGHMEPFEKCTPLSLKDLTLQKINLRYAANSYCKFIDFRVMKALRIFGCPGADSLFAELSKSHKLPERLETLEFKHDDNQENDALNALDGFLKLVSGIKVLTMDICYAKQLPSADGIIRHSRTLRELNVHGSRGDGEEEELIIDFDDFEKICKSCSSIEQLSMAFPTTSLIRPISDSFQAFENALGDLANLITLNITTWPTNTPSTSRLPRKTYEILLQSLANSGFEHSIHHASSRTPPRSSKLAVIAFGSSDRVYDREDSKNQIIFVKGRQTDPFGGEKPLAVQVGWCLRKFVEPRSDVLDFSLARSCRPPTREPPASEDSE >lcl|scaffold14_rev_g8.t1 29180|30106 MFRARDSLRKLRSQGLPSTKIWLPTPRSQRLLASFAKSRNTFPWHYAVPAAMGAAVFSFVFIAQSQKGSLPYPGGCCSRDRKPLLVSYYTDKPCTLRDVTDIAGLMAAMWVSERINEQSSSKDALTVKDDLLFDIASRLALLRNGGVEGSSLGKTECLQMFAESESNRLKDSPFGRESCDLSLMSGDAKTAWVADSIGYFIFSDRMDEPHPLSKLDDWIDHLIDRGSFVESKFMTVLNDVERVIMIEMYKEARKAYQNAETRKEMEAMGLPVASAQDMMLIDAMMHVYRRLSGDRVLKDVGHEDDVGH >lcl|scaffold14_fwd_g9.t1 30672|31824 MPIENIQNPSAKHWNCTNTLNPSILPFHQSLPDYAITPLTPLEALAEDLGIGHIYVKDEGTRFGLPAFKILGASWAVYRAIAAQLGKPTTTSLDDLCNAAEGRGIRIVTTSEGNWGRAVARMGRYLGVAVTVYVPRYMDEATRGKISREGAEVILHKGEYDDCLFTCRHVSEETGALLVLDTSFDGYTEIPQWVTDGYSSMLEEVDSQLRAAIDRPATHAIASVGVGSWAHAVVAHYKSKDPTAAVATVEPKTANCLATSLDAGKIISVKTDVTIMNGMNCGTVSDIAWPYLRDGVDASVTVSEMQAHEAVLYLRAHGVNAGPCGAAPLAALRELKKLNWLGLGSDSVVVLYCTEAARAYKEPTSE >lcl|scaffold14_rev_g10.t1 31923|33129 MSHHESYDSHKMPNMHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAATAAFILQKESPALGSVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLGMPEVFMGSPASIFTSYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGSDAFTYMSYWWIGIFINIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS >lcl|scaffold14_rev_g10.t2 31923|33087 MHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAATAAFILQKESPALGSVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLGMPEVFMGSPASIFTSYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGSDAFTYMSYWWIGIFINIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS