--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/README	Thu Jun 06 01:29:52 2013 -0400
@@ -0,0 +1,9 @@
+This package is an installer for the MSGF+ search tool.
+
+System Requirements. Ensure that you have the following packages installed on your system
+- unzip
+- java runtime 6 or higher
+
+
+Further information about MSGF+ can be found at
+http://proteomics.ucsd.edu/Software/MSGFPlus.html#documentation

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jun 06 01:29:52 2013 -0400
@@ -0,0 +1,26 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="galaxy_protk" version="1.2.0">
+         <repository toolshed="http://10.211.55.35:9009" name="galaxy_protk" owner="iracooke" changeset_revision="0a2b3dcc986c" prior_installation_required="True"/>
+    </package>
+    <package name="msgfplus" version="20130227">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
+                <action type="shell_command">sh install_msgfplus.sh $INSTALL_DIR 1.2.0</action>
+                <action type="move_file">
+                    <source>install_msgfplus.sh</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+            Installs MSGF+ via the protk installer
+        </readme>
+    </package>
+
+</tool_dependency>