annotate tool_dependencies.xml @ 13:7d5c719ffbe2

Update dependencies
author Ira Cooke <iracooke@gmail.com>
date Wed, 30 Oct 2013 14:01:36 +1100
parents 52d137020163
children d5a82ba662c6
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
18bf78e49e88 Uploaded
iracooke
parents:
diff changeset
1 <?xml version="1.0"?>
18bf78e49e88 Uploaded
iracooke
parents:
diff changeset
2 <tool_dependency>
6
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
3
13
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
4 <package name="protk" version="1.2.5">
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
5 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="c57f1eeb59dd"/>
5
3aafd0a91830 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 4
diff changeset
6 </package>
3aafd0a91830 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 4
diff changeset
7
3aafd0a91830 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 4
diff changeset
8 <package name="blast+" version="2.2.27">
13
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
9 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e" prior_installation_required="True"/>
5
3aafd0a91830 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 4
diff changeset
10 </package>
13
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
11
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
12 <package name="omssa" version="2.1.9">
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
13 <!-- <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> -->
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
14 <install version="1.0">
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
15 <actions>
6
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
16 <action type="set_environment">
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
17 <environment_variable name="PROTK_BLAST_ROOT" action="set_to">FROMPATH</environment_variable>
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
18 </action>
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
19 </actions>
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
20 </install>
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
21 <readme>
13
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
22 Sets environment variables for OMSSA
6
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
23 </readme>
42b0c5c270f9 Dependency tweaks
Ira Cooke <iracooke@gmail.com>
parents: 5
diff changeset
24 </package>
13
7d5c719ffbe2 Update dependencies
Ira Cooke <iracooke@gmail.com>
parents: 12
diff changeset
25
0
18bf78e49e88 Uploaded
iracooke
parents:
diff changeset
26 </tool_dependency>