Mercurial > repos > imgteam > color_deconvolution

changeset 3:469cb58a3be9 draft default tip

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/color_deconvolution/ commit 285c5933cd065bb904026cbea98f5488a0d9510d
author imgteam
date Wed, 17 Dec 2025 12:43:06 +0000
parents 387414aa6496
children
files color_deconvolution.xml creators.xml test-data/im_axes_yx.tif test-data/im_axes_yx.tiff
diffstat 4 files changed, 19 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/color_deconvolution.xml	Thu Mar 06 18:12:13 2025 +0000
+++ b/color_deconvolution.xml	Wed Dec 17 12:43:06 2025 +0000
@@ -1,4 +1,4 @@
-<tool id="ip_color_deconvolution" name="Perform color deconvolution or transformation" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> 
+<tool id="ip_color_deconvolution" name="Perform color deconvolution or transformation" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
     <description></description>
     <macros>
         <import>creators.xml</import>
@@ -24,7 +24,7 @@
         <requirement type="package" version="0.3.1">giatools</requirement>
     </requirements>
     <command detect_errors="aggressive">
-        <![CDATA[ 
+        <![CDATA[
 
         python '$__tool_directory__/color_deconvolution.py'
 
@@ -150,7 +150,7 @@
 
         <test expect_failure="true">
             <!-- Test with image that only has 2 axes instead of required 3 -->
-            <param name="input" value="im_axes_yx.tif" />
+            <param name="input" value="im_axes_yx.tiff" />
             <param name="convtype" value="rgb2hsv" />
         </test>
         <test expect_failure="true">
--- a/creators.xml	Thu Mar 06 18:12:13 2025 +0000
+++ b/creators.xml	Wed Dec 17 12:43:06 2025 +0000
@@ -5,6 +5,11 @@
         <yield />
     </xml>
 
+    <xml name="creators/kostrykin">
+        <person givenName="Leonid" familyName="Kostrykin"/>
+        <yield/>
+    </xml>
+
     <xml name="creators/rmassei">
         <person givenName="Riccardo" familyName="Massei"/>
         <yield/>
@@ -24,5 +29,15 @@
         <person givenName="Till" familyName="Korten"/>
         <yield/>
     </xml>
-    
+
+    <xml name="creators/pavanvidem">
+        <person givenName="Pavan" familyName="Videm"/>
+        <yield/>
+    </xml>
+
+    <xml name="creators/tuncK">
+        <person givenName="Tunc" familyName="Kayikcioglu"/>
+        <yield/>
+    </xml>
+
 </macros>
Binary file test-data/im_axes_yx.tif has changed
Binary file test-data/im_axes_yx.tiff has changed