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comparison yolo.xml @ 21:916208f6745d draft

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author greg
date Wed, 18 Oct 2017 13:21:33 -0400
parents c834e636fd66
children 87c8a4b6020d
comparison
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20:c834e636fd66 21:916208f6745d
10 cp -R /home/greg/_conda/envs/__darknet@1.0/bin/* . 10 cp -R /home/greg/_conda/envs/__darknet@1.0/bin/* .
11 #for $i in $input: 11 #for $i in $input:
12 #set input_filename = $i.file_name 12 #set input_filename = $i.file_name
13 #set full_name = $i.name 13 #set full_name = $i.name
14 #set head = $full_name.split('.')[0] 14 #set head = $full_name.split('.')[0]
15 #set output_filename_png = '%s_predictions.png' % $head 15 #set output_filename_image = '%s_predictions.png' % $head
16 #set output_filename_shape_confidence = '%s_shape_detection_confidence.tabular' % $head 16 #set output_filename_shape_confidence = '%s_shape_detection_confidence.tabular' % $head
17 && ln -s $input_filename input_dir/$full_name 17 && ln -s $input_filename input_dir/$full_name
18 && darknet detect cfg/yolo.cfg yolo.weights 'input_dir/$full_name' -thresh $thresh > output_shape_confidence_dir/$output_filename_shape_confidence 18 && darknet detect cfg/yolo.cfg yolo.weights 'input_dir/$full_name' -thresh $thresh -f jpg > output_shape_confidence_dir/$output_filename_shape_confidence
19 && mv ./predictions.png output_png_dir/$output_filename_png 19 && mv ./predictions.jpg output_png_dir/$output_filename_image
20 #end for 20 #end for
21 ]]></command> 21 ]]></command>
22 <inputs> 22 <inputs>
23 <param name="input" format="jpg" type="data_collection" collection_type="list" label="Collection of image files" /> 23 <param name="input" format="jpg" type="data_collection" collection_type="list" label="Collection of image files" />
24 <param name="thresh" type="float" value="0.25" label="Object detection threshold" /> 24 <param name="thresh" type="float" value="0.25" label="Object detection threshold" />
26 <option value="yes" selected="true">Yes</option> 26 <option value="yes" selected="true">Yes</option>
27 <option value="no">No</option> 27 <option value="no">No</option>
28 </param> 28 </param>
29 </inputs> 29 </inputs>
30 <outputs> 30 <outputs>
31 <collection name="output_shape" type="list" label="${tool.name} (shapes) on ${on_string}">
32 <discover_datasets pattern="__name__" directory="output_png_dir" format="png" />
33 </collection>
34 <collection name="output_shape_confidence" type="list" label="${tool.name} (shape detection confidence) on ${on_string}"> 31 <collection name="output_shape_confidence" type="list" label="${tool.name} (shape detection confidence) on ${on_string}">
35 <discover_datasets pattern="__name__" directory="output_shape_confidence_dir" format="tabular" /> 32 <discover_datasets pattern="__name__" directory="output_shape_confidence_dir" format="tabular" />
36 <filter>output_shape_confidence == 'yes'</filter> 33 <filter>output_shape_confidence == 'yes'</filter>
34 </collection>
35 <collection name="output_shape" type="list" label="${tool.name} (shapes) on ${on_string}">
36 <discover_datasets pattern="__name__" directory="output_png_dir" format="png" />
37 </collection> 37 </collection>
38 </outputs> 38 </outputs>
39 <tests> 39 <tests>
40 <test> 40 <test>
41 </test> 41 </test>