Mercurial > repos > greg > validate_affy_metadata

diff validate_affy_metadata.py @ 17:17db886fbfad draft

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Uploaded
author greg
date Tue, 04 Dec 2018 13:51:21 -0500
parents 73a0f0ba30d4
children 38166b76f47a
line wrap: on
line diff
--- a/validate_affy_metadata.py	Mon Nov 19 13:43:29 2018 -0500
+++ b/validate_affy_metadata.py	Tue Dec 04 13:51:21 2018 -0500
@@ -75,7 +75,7 @@
         if i > 97:
             accumulated_msgs = add_error_msg(accumulated_msgs, "The input file contains more than 97 lines (must be 1 header line and no more than 96 data lines).")
             stop_error(accumulated_msgs)
-        items = line.split(",")
+        items = line.split("\t")
         if len(items) != 29:
             accumulated_msgs = add_error_msg(accumulated_msgs, "Line %d contains %s columns, (must be 29)." % (i, len(items)))
             stop_error(accumulated_msgs)