Mercurial > repos > greg > package_icqsol_1_0
changeset 4:789f4e7df861 draft
Uploaded
| author | greg |
|---|---|
| date | Thu, 19 Nov 2015 21:25:50 -0500 |
| parents | 245029376e25 |
| children | 70c2d4e3a34b |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 112 insertions(+), 47 deletions(-) [+] |
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--- a/tool_dependencies.xml Sun Nov 15 10:30:47 2015 -0500 +++ b/tool_dependencies.xml Thu Nov 19 21:25:50 2015 -0500 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <tool_dependency> <package name="cmake" version="3.2.3"> - <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="icqsol" version="1.0"> <install version="1.0"> @@ -11,7 +11,7 @@ <action target_filename="Anaconda-2.3.0-Linux-x86_64.sh" type="download_file">https://3230d63b5fc54e62148e-c95ac804525aac4b6dba79b00b39d1d3.ssl.cf1.rackcdn.com/Anaconda-2.3.0-Linux-x86_64.sh</action> <action type="set_environment_for_install"> - <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="cmake" version="3.2.3" /> </repository> </action> @@ -19,14 +19,63 @@ <action type="shell_command">bash Anaconda-2.3.0-Linux-x86_64.sh -b -f -p $INSTALL_DIR</action> <!-- Install VTK 6.3.0 into the above Python --> + <action type="make_directory">$TMP_WORK_DIR/vtk</action> + <action type="change_directory">$TMP_WORK_DIR/vtk</action> + <action target_filename="VTK-6.2.0.tar.gz" type="download_file">http://www.vtk.org/files/release/6.2/VTK-6.2.0.tar.gz</action> + <action type="shell_command">tar xfvz VTK-6.2.0.tar.gz</action> + <action type="change_directory">VTK-6.2.0</action> <action type="shell_command"> export PATH=$INSTALL_DIR/bin:$PATH && + export PYTHONPATH=$INSTALL_DIR:$PYTHONPATH && export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH && export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH && - conda install -c https://conda.anaconda.org/anaconda vtk --yes + cmake \ + -DCMAKE_BUILD_TYPE:STRING=Release \ + -DCMAKE_INSTALL_PREFIX:PATH=`pwd`/../build \ + -DVTK_WRAP_PYTHON:BOOL=ON \ + -DVTK_Group_StandAlone:BOOL=OFF \ + -DVTK_Group_Rendering:BOOL=OFF \ + -DModule_vtkCommonColor:BOOL=ON \ + -DModule_vtkCommonComputationalGeometry:BOOL=ON \ + -DModule_vtkCommonDataModel:BOOL=ON \ + -DModule_vtkCommonExecutionModel:BOOL=ON \ + -DModule_vtkCommonMath:BOOL=ON \ + -DModule_vtkCommonMisc:BOOL=ON \ + -DModule_vtkCommonSystem:BOOL=ON \ + -DModule_vtkCommonTransforms:BOOL=ON \ + -DModule_vtkFiltersCore:BOOL=ON \ + -DModule_vtkFiltersExtraction:BOOL=ON \ + -DModule_vtkFiltersGeneral:BOOL=ON \ + -DModule_vtkFiltersGeneric:BOOL=ON \ + -DModule_vtkFiltersGeometry:BOOL=ON \ + -DModule_vtkFiltersPython:BOOL=ON \ + -DModule_vtkImagingHybrid:BOOL=ON \ + -DModule_vtkIOCore:BOOL=ON \ + -DModule_vtkIOGeometry:BOOL=ON \ + -DModule_vtkIOLegacy:BOOL=ON \ + -DModule_vtkWrappingPythonCore:BOOL=ON \ + -DModule_vtkIOPLY:BOOL=ON \ + -DVTK_INSTALL_PYTHON_MODULE_DIR:PATH=$INSTALL_DIR/lib/python2.7/site-packages \ + -DPYTHON_EXECUTABLE:PATH=$INSTALL_DIR/bin/python \ + -DPYTHON_LIBRARY:PATH=$INSTALL_DIR/lib/libpython2.7.so \ + -DPYTHON_INCLUDE_DIR:PATH=$INSTALL_DIR/include/python2.7 . && + make -j 8 && + make install </action> + <action type="move_directory_files"> + <source_directory>../build/bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>../build/include</source_directory> + <destination_directory>$INSTALL_DIR/include</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>../build/lib</source_directory> + <destination_directory>$INSTALL_DIR/lib</destination_directory> + </action> <!-- Install and compile pycsg version 0.3.0 as a package in the above Python --> <action type="make_directory">$TMP_WORK_DIR/pycsg</action> @@ -42,20 +91,6 @@ </action> - <!-- Install and compile pytriangle version 1.0 as a package in the above Python --> - <action type="make_directory">$TMP_WORK_DIR/pytriangle</action> - <action type="change_directory">$TMP_WORK_DIR/pytriangle</action> - <action type="shell_command">git clone https://github.com/pletzer/pytriangle.git</action> - <action type="change_directory">pytriangle</action> - <action type="shell_command"> - - export PATH=$INSTALL_DIR/bin:$PATH && - export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH && - export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH && - $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR - - </action> - <!-- Install and compile icqsol version 1.0 as a package in the above Python --> <action type="make_directory">$TMP_WORK_DIR/icqsol</action> <action type="change_directory">$TMP_WORK_DIR/icqsol</action> @@ -65,7 +100,8 @@ export PATH=$INSTALL_DIR/bin:$PATH && export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH && - cmake -DINSTALL_USER=OFF -DINSTALL_PREFIX=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR + $INSTALL_DIR/bin/python setup.py develop --prefix=$INSTALL_DIR + $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR </action> @@ -75,7 +111,7 @@ the right Python from the environment bin directory. --> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> - <environment_variable action="set_to" name="ANACONDAHOME">$INSTALL_DIR</environment_variable> + <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> <environment_variable action="set_to" name="ICQSOL_ROOT_DIR">$INSTALL_DIR</environment_variable> </action> </actions> @@ -85,25 +121,69 @@ <action target_filename="Anaconda-2.3.0-MacOSX-x86_64.sh" type="download_file">https://3230d63b5fc54e62148e-c95ac804525aac4b6dba79b00b39d1d3.ssl.cf1.rackcdn.com/Anaconda-2.3.0-MacOSX-x86_64.sh</action> <action type="set_environment_for_install"> - <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="cmake" version="3.2.3" /> </repository> </action> <action type="shell_command">bash Anaconda-2.3.0-MacOSX-x86_64.sh -b -f -p $INSTALL_DIR</action> - <!-- Install VTK 6.3.0 into the above Python --> + <!-- Install and compile VTK 6.2.0 as a package in the above Python --> + <action type="make_directory">$TMP_WORK_DIR/vtk</action> + <action type="change_directory">$TMP_WORK_DIR/vtk</action> + <action target_filename="VTK-6.2.0.tar.gz" type="download_file">http://www.vtk.org/files/release/6.2/VTK-6.2.0.tar.gz</action> + <action type="shell_command">tar xfvz VTK-6.2.0.tar.gz</action> + <action type="change_directory">VTK-6.2.0</action> <action type="shell_command"> - export PATH=$INSTALL_DIR/bin:$PATH && - export DYLD_LIBRARY_PATH=$INSTALL_DIR/lib:$DYLD_LIBRARY_PATH && + export PATH=$INSTALL_DIR/bin:$INSTALL_DIR/bin:$PATH && export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH && - conda install -c https://conda.anaconda.org/anaconda vtk --yes + cmake \ + -DCMAKE_BUILD_TYPE:STRING=Release \ + -DCMAKE_INSTALL_PREFIX:PATH=`pwd`/../build \ + -DVTK_WRAP_PYTHON:BOOL=ON \ + -DVTK_Group_StandAlone:BOOL=OFF \ + -DVTK_Group_Rendering:BOOL=OFF \ + -DModule_vtkCommonColor:BOOL=ON \ + -DModule_vtkCommonComputationalGeometry:BOOL=ON \ + -DModule_vtkCommonDataModel:BOOL=ON \ + -DModule_vtkCommonExecutionModel:BOOL=ON \ + -DModule_vtkCommonMath:BOOL=ON \ + -DModule_vtkCommonMisc:BOOL=ON \ + -DModule_vtkCommonSystem:BOOL=ON \ + -DModule_vtkCommonTransforms:BOOL=ON \ + -DModule_vtkFiltersCore:BOOL=ON \ + -DModule_vtkFiltersExtraction:BOOL=ON \ + -DModule_vtkFiltersGeneral:BOOL=ON \ + -DModule_vtkFiltersGeneric:BOOL=ON \ + -DModule_vtkFiltersGeometry:BOOL=ON \ + -DModule_vtkFiltersPython:BOOL=ON \ + -DModule_vtkImagingHybrid:BOOL=ON \ + -DModule_vtkIOCore:BOOL=ON \ + -DModule_vtkIOGeometry:BOOL=ON \ + -DModule_vtkIOLegacy:BOOL=ON \ + -DModule_vtkWrappingPythonCore:BOOL=ON \ + -DModule_vtkIOPLY:BOOL=ON \ + -DVTK_INSTALL_PYTHON_MODULE_DIR:PATH=$INSTALL_DIR/lib/python2.7/site-packages \ + -DPYTHON_EXECUTABLE:PATH=$INSTALL_DIR/bin/python \ + -DPYTHON_LIBRARY:PATH=$INSTALL_DIR/lib/libpython2.7.dylib \ + -DPYTHON_INCLUDE_DIR:PATH=$INSTALL_DIR/include/python2.7 . && + make -j 8 && + make install </action> - <action type="shell_command"> - ln -s $INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin/vtkpython $INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin/python - </action> + <action type="move_directory_files"> + <source_directory>../build/bin</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>../build/include</source_directory> + <destination_directory>$INSTALL_DIR/include</destination_directory> + </action> + <action type="move_directory_files"> + <source_directory>../build/lib</source_directory> + <destination_directory>$INSTALL_DIR/lib</destination_directory> + </action> <!-- Install and compile pycsg version 0.3.0 as a package in the above Python --> <action type="make_directory">$TMP_WORK_DIR/pycsg</action> @@ -112,27 +192,12 @@ <action type="change_directory">pycsg</action> <action type="shell_command"> - export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH && - export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH && + export PATH=$INSTALL_DIR/bin:$PATH && export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH && $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR </action> - <!-- Install and compile pytriangle version 1.0 as a package in the above Python --> - <action type="make_directory">$TMP_WORK_DIR/pytriangle</action> - <action type="change_directory">$TMP_WORK_DIR/pytriangle</action> - <action type="shell_command">git clone https://github.com/pletzer/pytriangle.git</action> - <action type="change_directory">pytriangle</action> - <action type="shell_command"> - - export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH && - export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH && - export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH - $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR - - </action> - <!-- Install and compile icqsol version 1.0 as a package in the above Python --> <action type="make_directory">$TMP_WORK_DIR/icqsol</action> <action type="change_directory">$TMP_WORK_DIR/icqsol</action> @@ -140,9 +205,9 @@ <action type="change_directory">icqsol</action> <action type="shell_command"> - export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH && - export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH && - cmake -DINSTALL_USER=OFF -DINSTALL_PREFIX=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR + export PATH=$INSTALL_DIR/bin:$PATH && + $INSTALL_DIR/bin/python setup.py develop --prefix=$INSTALL_DIR && + $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR </action> @@ -157,7 +222,7 @@ environment, and so on. --> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> - <environment_variable action="set_to" name="ANACONDAHOME">$INSTALL_DIR</environment_variable> + <environment_variable action="prepend_to" name="DYLD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable> <environment_variable action="set_to" name="ICQSOL_ROOT_DIR">$INSTALL_DIR</environment_variable> </action> </actions>