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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3
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4 <package name="icqsol" version="1.0">
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5 <install version="1.0">
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6 <actions_group>
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7 <actions os="linux" architecture="x86_64">
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8 <!-- Install and compile Anaconda 2.3.0 which provides Python 2.7.10 -->
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9 <action type="download_file" target_filename="Anaconda-2.3.0-Linux-x86_64.sh">https://3230d63b5fc54e62148e-c95ac804525aac4b6dba79b00b39d1d3.ssl.cf1.rackcdn.com/Anaconda-2.3.0-Linux-x86_64.sh</action>
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10 <action type="shell_command">bash Anaconda-2.3.0-Linux-x86_64.sh -b -f -p $INSTALL_DIR</action>
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11
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12 <!-- Install VTK 6.3.0 into the above Python -->
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13 <action type="shell_command">
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14 <![CDATA[
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15 export PATH=$INSTALL_DIR/bin:$PATH &&
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16 export PYTHONPATH=$INSTALL_DIR/lib/python2.7/site-packages:$INSTALL_DIR/lib/python2.7:$INSTALL_DIR/lib:$INSTALL_DIR:$PYTHONPATH &&
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17 export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH &&
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18 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH &&
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19 conda install -c https://conda.anaconda.org/anaconda vtk --yes
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20 ]]>
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21 </action>
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22
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23 <!-- Install and compile pycsg version 0.3.0 as a package in the above Python -->
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24 <action type="make_directory">$TMP_WORK_DIR/pycsg</action>
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25 <action type="change_directory">$TMP_WORK_DIR/pycsg</action>
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26 <action type="shell_command">git clone https://github.com/pletzer/pycsg.git</action>
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27 <action type="change_directory">pycsg</action>
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28 <action type="shell_command">
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29 <![CDATA[
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30 export PATH=$INSTALL_DIR/bin:$PATH &&
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31 export PYTHONPATH=$INSTALL_DIR/lib/python2.7/site-packages:$INSTALL_DIR/lib/python2.7:$INSTALL_DIR/lib:$INSTALL_DIR:$PYTHONPATH &&
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32 export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH &&
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33 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH &&
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34 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
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35 ]]>
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36 </action>
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37
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38 <!-- Install and compile pytriangle version 1.0 as a package in the above Python -->
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39 <action type="make_directory">$TMP_WORK_DIR/pytriangle</action>
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40 <action type="change_directory">$TMP_WORK_DIR/pytriangle</action>
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41 <action type="shell_command">git clone https://github.com/pletzer/pytriangle.git</action>
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42 <action type="change_directory">pytriangle</action>
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43 <action type="shell_command">
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44 <![CDATA[
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45 export PATH=$INSTALL_DIR/bin:$PATH &&
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46 export PYTHONPATH=$INSTALL_DIR/lib/python2.7/site-packages:$INSTALL_DIR/lib/python2.7:$INSTALL_DIR/lib:$INSTALL_DIR:$PYTHONPATH &&
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47 export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH &&
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48 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH &&
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49 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
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50 ]]>
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51 </action>
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52
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53 <!-- Install and compile icqsol version 1.0 as a package in the above Python -->
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54 <action type="make_directory">$TMP_WORK_DIR/icqsol</action>
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55 <action type="change_directory">$TMP_WORK_DIR/icqsol</action>
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56 <action type="shell_command">git clone https://github.com/pletzer/icqsol.git</action>
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57 <action type="change_directory">icqsol</action>
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58 <action type="shell_command">
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59 <![CDATA[
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60 export PATH=$INSTALL_DIR/bin:$PATH &&
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61 export PYTHONPATH=$INSTALL_DIR/lib/python2.7/site-packages:$INSTALL_DIR/lib/python2.7:$INSTALL_DIR/lib:$INSTALL_DIR:$PYTHONPATH &&
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62 export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$LD_LIBRARY_PATH &&
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63 cmake -DINSTALL_USER=OFF -DINSTALL_PREFIX=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR
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64 ]]>
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65 </action>
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66
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67 <action type="set_environment">
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68 <!--
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69 Only the PATH environment variable needs to be modified for an Anaconda environment so that it gets
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70 the right Python from the environment bin directory.
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71 -->
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72 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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73 <environment_variable action="set_to" name="ANACONDAHOME">$INSTALL_DIR</environment_variable>
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74 <environment_variable action="set_to" name="ICQSOL_ROOT_DIR">$INSTALL_DIR</environment_variable>
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75 </action>
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76 </actions>
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77
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78 <actions os="darwin" architecture="x86_64">
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79 <!-- Install and compile Anaconda 2.3.0 which provides Python 2.7.10 -->
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80 <action type="download_file" target_filename="Anaconda-2.3.0-MacOSX-x86_64.sh">https://3230d63b5fc54e62148e-c95ac804525aac4b6dba79b00b39d1d3.ssl.cf1.rackcdn.com/Anaconda-2.3.0-MacOSX-x86_64.sh</action>
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81 <action type="shell_command">bash Anaconda-2.3.0-MacOSX-x86_64.sh -b -f -p $INSTALL_DIR</action>
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82
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83 <!-- Install VTK 6.3.0 into the above Python -->
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84 <action type="shell_command">
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85 <![CDATA[
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86 export PATH=$INSTALL_DIR/bin:$PATH &&
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87 export PYTHONPATH=$INSTALL_DIR/lib/python2.7/site-packages:$INSTALL_DIR/lib/python2.7:$INSTALL_DIR/lib:$INSTALL_DIR:$PYTHONPATH &&
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88 export DYLD_LIBRARY_PATH=$INSTALL_DIR/lib:$DYLD_LIBRARY_PATH &&
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89 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH &&
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90 conda install -c https://conda.anaconda.org/anaconda vtk --yes
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91 ]]>
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92 </action>
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93 <action type="shell_command">
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94 ln -s $INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin/vtkpython $INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin/python
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95 </action>
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96
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97 <!-- Install and compile pycsg version 0.3.0 as a package in the above Python -->
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98 <action type="make_directory">$TMP_WORK_DIR/pycsg</action>
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99 <action type="change_directory">$TMP_WORK_DIR/pycsg</action>
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100 <action type="shell_command">git clone https://github.com/pletzer/pycsg.git</action>
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101 <action type="change_directory">pycsg</action>
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102 <action type="shell_command">
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103 <![CDATA[
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104 export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH &&
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105 export PYTHONPATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7/site-packages:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7:pkgs/vtk-6.3.0-py27_0/lib:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin &&
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106 export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH &&
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107 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH &&
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108 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
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109 ]]>
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110 </action>
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111
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112 <!-- Install and compile pytriangle version 1.0 as a package in the above Python -->
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113 <action type="make_directory">$TMP_WORK_DIR/pytriangle</action>
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114 <action type="change_directory">$TMP_WORK_DIR/pytriangle</action>
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115 <action type="shell_command">git clone https://github.com/pletzer/pytriangle.git</action>
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116 <action type="change_directory">pytriangle</action>
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117 <action type="shell_command">
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118 <![CDATA[
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119 export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH &&
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120 export PYTHONPATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7/site-packages:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7:pkgs/vtk-6.3.0-py27_0/lib:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin &&
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121 export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH &&
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122 export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$PKG_CONFIG_PATH
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123 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR
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124 ]]>
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125 </action>
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126
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127 <!-- Install and compile icqsol version 1.0 as a package in the above Python -->
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128 <action type="make_directory">$TMP_WORK_DIR/icqsol</action>
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129 <action type="change_directory">$TMP_WORK_DIR/icqsol</action>
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130 <action type="shell_command">git clone https://github.com/pletzer/icqsol.git</action>
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131 <action type="change_directory">icqsol</action>
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132 <action type="shell_command">
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133 <![CDATA[
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134 export PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin:$PATH &&
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135 export PYTHONPATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7/site-packages:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib/python2.7:pkgs/vtk-6.3.0-py27_0/lib:$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/bin &&
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136 export DYLD_LIBRARY_PATH=$INSTALL_DIR/pkgs/vtk-6.3.0-py27_0/lib:$DYLD_LIBRARY_PATH &&
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137 cmake -DINSTALL_USER=OFF -DINSTALL_PREFIX=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR
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138 ]]>
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139 </action>
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140
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141 <action type="set_environment">
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142 <!--
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143 Only the PATH environment variable needs to be modified for an Anaconda environment so that it gets
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144 the right Python from the environment bin directory. The way Anaconda environments work is that they
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145 hard link everything that is installed into the environment. For all intents and purposes, this means
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146 that each environment is a completely separate installation of Python and all the packages. By using
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147 hard links, this is done efficiently. Thus, there's no need to mess with PYTHONPATH because the Python
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148 binary in the environment already searches the site-packages in the environment, and the lib of the
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149 environment, and so on.
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150 -->
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151 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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152 <environment_variable action="set_to" name="ANACONDAHOME">$INSTALL_DIR</environment_variable>
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153 <environment_variable action="set_to" name="ICQSOL_ROOT_DIR">$INSTALL_DIR</environment_variable>
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154 </action>
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155 </actions>
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156 </actions_group>
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157 </install>
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158 <readme>
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159 <![CDATA[
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160 This installation recipe installs the Anaconda version 2.3.0 of the Python programming language
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161 version 2.7.10. Anaconda is a completely free Python distribution (including for commercial use
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162 and redistribution). It includes more than 300 of the most popular Python packages for science,
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163 math, engineering, and data analysis. This list of packages is available at
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164 http://docs.continuum.io/anaconda/pkg-docs.
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165
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166 1) VTK version 6.3.0
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167
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168 The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D
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169 computer graphics, modeling, image processing, volume rendering, scientific visualization, and
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170 information visualization. VTK also includes ancillary support for 3D interaction widgets, two-
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171 and three-dimensional annotation, and parallel computing. At its core, VTK is implemented as a
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172 C++ toolkit, requiring users to build applications by combining various objects into an application.
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173 The system also supports automated wrapping of the C++ core into Python, Java, and Tcl, so VTK
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174 applications may also be written using these interpreted programming languages.
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175
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176 VTK employs Kitware’s Quality Software Process (CMake, CTest, CDash, and CPack) to build, test,
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177 and package the system, making VTK a cross-platform application dependent on test-driven development
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178 and extreme programming, and enabling the application to produce high-quality, robust code. VTK is
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179 used world-wide in commercial applications, as well as in research and development. It is the basis
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180 for many advanced visualization applications such as ParaView, VisIt, VisTrails, Slicer, MayaVi, and
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181 OsiriX.
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182
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183 3) Pycsg version 0.3.0
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184
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185 Constructive Solid Geometry (CSG) is a modeling technique that uses Boolean operations like union and
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186 intersection to combine 3D solids. This library implements CSG operations on meshes elegantly and
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187 concisely using BSP trees, and is meant to serve as an easily understandable implementation of the
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188 algorithm. All edge cases involving overlapping coplanar polygons in both solids are correctly handled.
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189
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190 4) Pytriangle version 1.0
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191
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192 Pytriangle is a python interface to the 2D triangulation program originally written by Jonathan Richard Shewchuck
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193
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194 5) Icqsol version 1.0
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195
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196 Icqsol is a collection of tools for constructing and solving partial differential equations.
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197 ]]>
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198
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199 </readme>
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200 </package>
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201 </tool_dependency>
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