Mercurial > repos > greg > multigps
view test-data/output_process1.txt @ 11:a75e532f0441 draft
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author | greg |
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date | Tue, 05 Jan 2016 08:19:39 -0500 |
parents | 7b15099378a7 |
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Using default read distribution. Providing your own read distribution file is highly recommended. Use --d option. Processing HitLoaders for: Abf1 1 Loading from IDX hit loader: /Users/gvk/work/git_workspace/galaxy/database/files/003/dataset_3093.dat Estimating scaling ratio for Abf1:1 Loaded experiments: Condition Abf1: #Replicates: 1 Condition Abf1: Rep Abf1:1 Signal: 0.0 Finding potential binding regions. PotentialRegionFilter: genomic threshold for Abf1:1 with bin width 368 = 1 0 potential regions found. Initialzing mixture model Caching sequences Caching completed Alpha Abf1 Range=368 1.0 Global noise per base initialization for Abf1 = 0.0000 Multi-condition positional priors: A given B:-0.1520 A given notB:-Infinity ============================ Round 0 ============================ Updated Abf1:1 read distribution from 0 binding events. Alpha Abf1 Range=662 1.0 MEME ExitValue: 1 Abf1 NOMOTIF ============================ Round 1 ============================ Updated Abf1:1 read distribution from 0 binding events. Alpha Abf1 Range=762 1.0 MEME ExitValue: 1 Abf1 NOMOTIF ============================ Round 2 ============================ Refined Abf1:1 read distribution from 0 binding events. Alpha Abf1 Range=762 1.0 MEME ExitValue: 1 Abf1 NOMOTIF ============================ ML read assignment ============================ Abf1:1 0 signal-noise ratio: NaN ML read assignment finished. ============================= Post-processing ============================== Binding event detection finished! Binding events are printed to files in /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files beginning with: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files Events post-analysis Peak-motif distance histograms Peak-peak distance histograms (same condition) Writing results report to: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files/multiGPS_dataset_3100_files_results.html