view test-data/output_process1.txt @ 11:a75e532f0441 draft

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author greg
date Tue, 05 Jan 2016 08:19:39 -0500
parents 7b15099378a7
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Using default read distribution.
Providing your own read distribution file is highly recommended. Use --d option.

Processing HitLoaders for:	Abf1	1
Loading from IDX hit loader:	/Users/gvk/work/git_workspace/galaxy/database/files/003/dataset_3093.dat
Estimating scaling ratio for Abf1:1
Loaded experiments:
 Condition Abf1:	#Replicates:	1
 Condition Abf1:	Rep Abf1:1
	Signal:	0.0
Finding potential binding regions.
PotentialRegionFilter: genomic threshold for Abf1:1 with bin width 368 = 1
0 potential regions found.
Initialzing mixture model
Caching sequences
Caching completed
Alpha Abf1	Range=368	1.0
Global noise per base initialization for Abf1 = 0.0000
Multi-condition positional priors:	A given B:-0.1520	A given notB:-Infinity

============================ Round 0 ============================
Updated Abf1:1 read distribution from 0 binding events.
Alpha Abf1	Range=662	1.0
MEME ExitValue: 1
Abf1	NOMOTIF

============================ Round 1 ============================
Updated Abf1:1 read distribution from 0 binding events.
Alpha Abf1	Range=762	1.0
MEME ExitValue: 1
Abf1	NOMOTIF

============================ Round 2 ============================
Refined Abf1:1 read distribution from 0 binding events.
Alpha Abf1	Range=762	1.0
MEME ExitValue: 1
Abf1	NOMOTIF

============================ ML read assignment ============================
Abf1:1	0	signal-noise ratio:	NaN
ML read assignment finished.

============================= Post-processing ==============================
Binding event detection finished!
Binding events are printed to files in /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files beginning with: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files
Events post-analysis
	Peak-motif distance histograms
	Peak-peak distance histograms (same condition)
Writing results report to: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files/multiGPS_dataset_3100_files_results.html