--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output_process1.txt	Sat Jan 02 14:07:37 2016 -0500
@@ -0,0 +1,49 @@
+Using default read distribution.
+Providing your own read distribution file is highly recommended. Use --d option.
+
+Processing HitLoaders for:	Abf1	1
+Loading from IDX hit loader:	/Users/gvk/work/git_workspace/galaxy/database/files/003/dataset_3093.dat
+Estimating scaling ratio for Abf1:1
+Loaded experiments:
+ Condition Abf1:	#Replicates:	1
+ Condition Abf1:	Rep Abf1:1
+	Signal:	0.0
+Finding potential binding regions.
+PotentialRegionFilter: genomic threshold for Abf1:1 with bin width 368 = 1
+0 potential regions found.
+Initialzing mixture model
+Caching sequences
+Caching completed
+Alpha Abf1	Range=368	1.0
+Global noise per base initialization for Abf1 = 0.0000
+Multi-condition positional priors:	A given B:-0.1520	A given notB:-Infinity
+
+============================ Round 0 ============================
+Updated Abf1:1 read distribution from 0 binding events.
+Alpha Abf1	Range=662	1.0
+MEME ExitValue: 1
+Abf1	NOMOTIF
+
+============================ Round 1 ============================
+Updated Abf1:1 read distribution from 0 binding events.
+Alpha Abf1	Range=762	1.0
+MEME ExitValue: 1
+Abf1	NOMOTIF
+
+============================ Round 2 ============================
+Refined Abf1:1 read distribution from 0 binding events.
+Alpha Abf1	Range=762	1.0
+MEME ExitValue: 1
+Abf1	NOMOTIF
+
+============================ ML read assignment ============================
+Abf1:1	0	signal-noise ratio:	NaN
+ML read assignment finished.
+
+============================= Post-processing ==============================
+Binding event detection finished!
+Binding events are printed to files in /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files beginning with: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files
+Events post-analysis
+	Peak-motif distance histograms
+	Peak-peak distance histograms (same condition)
+Writing results report to: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files/multiGPS_dataset_3100_files_results.html