|
0
|
1 <tool id="linear_fascile_evaluation" name="Linear fascicle evaluation" version="0.13.0">
|
|
|
2 <description>(LiFE) for tractography results</description>
|
|
|
3 <requirements>
|
|
|
4 <requirement type="package" version="0.13.0">dipy</requirement>
|
|
|
5 </requirements>
|
|
|
6 <command detect_errors="exit_code"><![CDATA[
|
|
|
7 python '$__tool_directory__/linear_fascile_evaluation.py'
|
|
2
|
8 --input '$input'
|
|
0
|
9 --output_life_candidates '$output_life_candidates'
|
|
8
|
10 &>/dev/null
|
|
0
|
11 ]]></command>
|
|
|
12 <inputs>
|
|
4
|
13 <param name="input" format="trackvis" type="data" label="Track Visualization Header"/>
|
|
0
|
14 </inputs>
|
|
|
15 <outputs>
|
|
|
16 <data name="output_life_candidates" format="png" label="${tool.name}: LiFE Candidates" />
|
|
|
17 </outputs>
|
|
|
18 <tests>
|
|
|
19 <test>
|
|
|
20 </test>
|
|
|
21 </tests>
|
|
|
22 <help>
|
|
|
23 **What it does**
|
|
|
24
|
|
|
25 Uses a forward model that predicts the signal from each of a set of streamlines, and fits a
|
|
|
26 linear model to these simultaneous predictions for evaluation of tractography results.
|
|
|
27
|
|
|
28 -----
|
|
|
29
|
|
|
30 **Options**
|
|
|
31
|
|
|
32 </help>
|
|
|
33 <citations>
|
|
|
34 </citations>
|
|
|
35 </tool>
|
