Mercurial > repos > greg > insect_phenology_model

changeset 49:d03ba99e25b6 draft

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Uploaded
author greg
date Mon, 13 Nov 2017 11:11:52 -0500
parents 66712cdec7c0
children 0579901169fb
files insect_phenology_model.R
diffstat 1 files changed, 9 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/insect_phenology_model.R	Mon Nov 13 11:05:42 2017 -0500
+++ b/insect_phenology_model.R	Mon Nov 13 11:11:52 2017 -0500
@@ -588,12 +588,12 @@
 
 # Subfigure 2: population size by life stage
 title <- paste("BSMB Total Population Size by Life Stage:", opt$location, ", Latitude:", latitude, ", Temperature Dates:", start_date, "to", end_date, sep=" ")
-plot(day.all, sa, main=title, type="l", ylim=c(0, max(se + se.se, sn + sn.se, sa + sa.se)), axes=F, lwd=2, xlab="", ylab="Number", cex=3, cex.lab=2, cex.axis=2, cex.main=2)
+plot(day.all, sa, main=title, type="l", ylim=c(0, max(se + se.se, sn + sn.se, sa + sa.se)), axes=F, lwd=2, xlab="", ylab="Number", cex=3, cex.lab=3, cex.axis=3, cex.main=3)
 # Young and old nymphs.
 lines(day.all, sn, lwd=2, lty=1, col=2)
 # Eggs
 lines(day.all, se, lwd=2, lty=1, col=4)
-axis(1, at = c(1:12) * 30 - 15, cex.axis=2, labels=c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
+axis(1, at = c(1:12) * 30 - 15, cex.axis=3, labels=c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
 axis(2, cex.axis = 3)
 leg.text <- c("Egg", "Nymph", "Adult")
 legend("topleft", leg.text, lty=c(1, 1, 1), col=c(4, 2, 1), cex=3)
@@ -612,13 +612,13 @@
 
 # Subfigure 3: population size by generation
 title <- paste("BSMB Total Population Size by Generation:", opt$location, ", Latitude:", latitude, ", Temperature Dates:", start_date, "to", end_date, sep=" ")
-plot(day.all, g0, main=title, type="l", ylim=c(0, max(g2)), axes=F, lwd=2, xlab="", ylab="Number", cex=3, cex.lab=2, cex.axis=2, cex.main=2)
+plot(day.all, g0, main=title, type="l", ylim=c(0, max(g2)), axes=F, lwd=2, xlab="", ylab="Number", cex=3, cex.lab=3, cex.axis=3, cex.main=3)
 lines(day.all, g1, lwd = 2, lty = 1, col = 2)
 lines(day.all, g2, lwd = 2, lty = 1, col = 4)
-axis(1, at = c(1:12) * 30 - 15, cex.axis = 2, labels = c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
+axis(1, at = c(1:12) * 30 - 15, cex.axis = 3, labels = c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
 axis(2, cex.axis = 3)
 leg.text <- c("P", "F1", "F2")
-legend("topleft", leg.text, lty = c(1, 1, 1), col =c(1, 2, 4), cex = 2)
+legend("topleft", leg.text, lty = c(1, 1, 1), col =c(1, 2, 4), cex=3)
 if (opt$se_plot == 1) {
     # Add SE lines to plot
     # SE for adults
@@ -634,13 +634,13 @@
 
 # Subfigure 4: adult population size by generation
 title <- paste("BSMB Adult Population Size by Generation:", opt$location, ", Latitude:", latitude, ", Temperature Dates:", start_date, "to", end_date, sep=" ")
-plot(day.all, g0a, ylim=c(0, max(g2a) + 100), main=title, type="l", axes=F, lwd=2, xlab="Year", ylab="Number", cex=3, cex.lab=2, cex.axis=2, cex.main=2)
+plot(day.all, g0a, ylim=c(0, max(g2a) + 100), main=title, type="l", axes=F, lwd=2, xlab="Year", ylab="Number", cex=3, cex.lab=3, cex.axis=3, cex.main=3)
 lines(day.all, g1a, lwd = 2, lty = 1, col = 2)
 lines(day.all, g2a, lwd = 2, lty = 1, col = 4)
-axis(1, at = c(1:12) * 30 - 15, cex.axis = 2, labels = c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
-axis(2, cex.axis = 2)
+axis(1, at = c(1:12) * 30 - 15, cex.axis = 3, labels = c("Jan", "Feb", "Mar", "Apr", "May", "Jun", "Jul", "Aug", "Sep", "Oct", "Nov", "Dec"))
+axis(2, cex.axis = 3)
 leg.text <- c("P", "F1", "F2")
-legend("topleft", leg.text, lty = c(1, 1, 1), col = c(1, 2, 4), cex = 2)
+legend("topleft", leg.text, lty = c(1, 1, 1), col = c(1, 2, 4), cex=3)
 if (opt$se_plot == 1) {
     # Add SE lines to plot
     # SE for adults