Mercurial > repos > greg > ideas
changeset 89:d6ab97fb8aca draft
Uploaded
author | greg |
---|---|
date | Fri, 25 Aug 2017 12:22:59 -0400 |
parents | 462ce06410c6 |
children | 029e18c3c17b |
files | ideas.xml |
diffstat | 1 files changed, 12 insertions(+), 2 deletions(-) [+] |
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--- a/ideas.xml Thu Aug 24 10:12:45 2017 -0400 +++ b/ideas.xml Fri Aug 25 12:22:59 2017 -0400 @@ -103,7 +103,11 @@ -maxerr $maxerr #end if -thread \${GALAXY_SLOTS:-4} -> $output_log +#if str($save_ideas_log) == "yes": + > $output_log +#else: + > /dev/null +#end if && mv ./*.cluster $output_cluster && mv ./*.para $output_para && mv ./*.profile $output_profile @@ -217,9 +221,15 @@ <param name="mcmc_num" type="integer" value="20" min="1" label="Number of maximization steps"/> <param name="minerr" type="float" value="0.5" min="0" label="Minimum standard deviation for the emission Gaussian distribution" help="Zero value results in the default value: 0.5"/> <param name="maxerr" type="float" value="1000000" min="0" label="Maximum standard deviation for the emission Gaussian distribution" help="Zero value results in the default value: 1000000"/> + <param name="save_ideas_log" type="select" display="radio" label="Save IDEAS log in an additional history item"> + <option value="no" selected="true">No</option> + <option value="yes">Yes</option> + </param> </inputs> <outputs> - <data name="output_log" format="txt" label="${tool.name} (ideas output log) on ${on_string}"/> + <data name="output_log" format="txt" label="${tool.name} (ideas output log) on ${on_string}"> + <filter>save_ideas_log == 'yes'</filter> + </data> <data name="output_cluster" format="txt" label="${tool.name} (local cell type clustering) on ${on_string}"/> <data name="output_para" format="tabular" label="${tool.name} (epigenetic state frequency, mean and variance parameters) on ${on_string}"/> <data name="output_profile" format="txt" label="${tool.name} (profile) on ${on_string}"/>