Mercurial > repos > greg > gene_family_phylogeny_builder

changeset 36:a9f6d08ee79e draft

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Uploaded
author greg
date Thu, 01 Jun 2017 09:31:59 -0400
parents 88c9bd1583d8
children b07dca8c7bfd
files gene_family_phylogeny_builder.xml
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
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line diff
--- a/gene_family_phylogeny_builder.xml	Tue May 23 10:54:28 2017 -0400
+++ b/gene_family_phylogeny_builder.xml	Thu Jun 01 09:31:59 2017 -0400
@@ -179,6 +179,7 @@
  * **Bootstrap replicates** - number of bootstrap replicates for RAxML to conduct a rapid bootstrap analysis and search for the best-scoring ML tree (default = 100).
  * **Maximum orthogroup size** - maximum number of sequences allowed in orthogroup alignments (default = 100).
  * **Minimum orthogroup size** - minimum number of sequences allowed in orthogroup alignments (default = 4).
+ * **Output additional directory of phylogenetic tree files** - selecting 'Yes' will produce an additional output that has an associated directory of files that are copies of the  elements of the phylogenetic trees output dataset collection (this output will be used for future downstream tools).
 
 .. _repository: https://github.com/dePamphilis/PlantTribes/tree/master/config