Mercurial > repos > greg > gene_family_phylogeny_builder

changeset 28:62fe699992a5 draft

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Uploaded
author greg
date Fri, 12 May 2017 14:13:56 -0400
parents 6374c987b4a8
children 3d78d366dfcc
files utils.py
diffstat 1 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/utils.py	Fri May 12 11:34:14 2017 -0400
+++ b/utils.py	Fri May 12 14:13:56 2017 -0400
@@ -27,14 +27,17 @@
     return fstderr, fherr, fstdout, fhout
 
 
-def move_directory_files(source_dir, destination_dir):
+def move_directory_files(source_dir, destination_dir, copy=False):
     source_directory = os.path.abspath(source_dir)
     destination_directory = os.path.abspath(destination_dir)
     if not os.path.isdir(destination_directory):
         os.makedirs(destination_directory)
     for dir_entry in os.listdir(source_directory):
         source_entry = os.path.join(source_directory, dir_entry)
-        shutil.move(source_entry, destination_directory)
+        if copy:
+            shutil.copy(source_entry, destination_directory)
+        else:
+            shutil.move(source_entry, destination_directory)
 
 
 def run_command(cmd):