Mercurial > repos > greg > gene_family_classifier
changeset 82:539acfede958 draft
Uploaded
| author | greg |
|---|---|
| date | Thu, 23 Feb 2017 09:10:19 -0500 |
| parents | d8975fc916e0 |
| children | b2c402ec0f04 |
| files | gene_family_classifier.xml |
| diffstat | 1 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/gene_family_classifier.xml Thu Feb 23 08:46:07 2017 -0500 +++ b/gene_family_classifier.xml Thu Feb 23 09:10:19 2017 -0500 @@ -116,21 +116,21 @@ #else: #set out_file = $output_ptortho #end if - && echo '<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n' > $out_file + && echo -e '<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n' > $out_file #for $fname in sorted($os.listdir($orthogroups_fasta_src_dir)): - && echo '<li><a href="$fname">$fname</a></li>\n' >> $out_file + && echo -e '<li><a href="$fname">$fname</a></li>\n' >> $out_file #end for - && echo '</ul>\n</body>\n</html>\n' >> $out_file + && echo -e '</ul>\n</body>\n</html>\n' >> $out_file && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true #end if #if $single_copy_orthogroup: #if $create_ortho_sequences: - && echo '<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n' > $output_ptsco + && echo -e '<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n' > $output_ptsco #for $fname in sorted($os.listdir($orthogroups_fasta_src_dir)): - && echo '<li><a href="$fname">$fname</a></li>\n' >> $output_ptsco + && echo -e '<li><a href="$fname">$fname</a></li>\n' >> $output_ptsco #end for - && echo '</ul>\n</body>\n</html>\n' >> $output_ptsco + && echo -e '</ul>\n</body>\n</html>\n' >> $output_ptsco && mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir || true #end if #end if