# HG changeset patch
# User greg
# Date 1487859019 18000
# Node ID 539acfede958c06f47d1e435f25c9243b086e801
# Parent d8975fc916e09bfc6b60b85c05f3a63de1afb084
Uploaded
diff -r d8975fc916e0 -r 539acfede958 gene_family_classifier.xml
--- a/gene_family_classifier.xml Thu Feb 23 08:46:07 2017 -0500
+++ b/gene_family_classifier.xml Thu Feb 23 09:10:19 2017 -0500
@@ -116,21 +116,21 @@
#else:
#set out_file = $output_ptortho
#end if
- && echo '\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n' > $out_file
+ && echo -e '\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n' > $out_file
#for $fname in sorted($os.listdir($orthogroups_fasta_src_dir)):
- && echo '- $fname
\n' >> $out_file
+ && echo -e '- $fname
\n' >> $out_file
#end for
- && echo '
\n\n\n' >> $out_file
+ && echo -e '
\n\n\n' >> $out_file
&& mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true
#end if
#if $single_copy_orthogroup:
#if $create_ortho_sequences:
- && echo '\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n' > $output_ptsco
+ && echo -e '\n\nGalaxy - GeneFamilyClassifier Output\n\n\n\n\n' > $output_ptsco
#for $fname in sorted($os.listdir($orthogroups_fasta_src_dir)):
- && echo '- $fname
\n' >> $output_ptsco
+ && echo -e '- $fname
\n' >> $output_ptsco
#end for
- && echo '
\n\n\n' >> $output_ptsco
+ && echo -e '
\n\n\n' >> $output_ptsco
&& mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir || true
#end if
#end if