Mercurial > repos > greg > gene_family_classifier

changeset 135:08d59ab0eacb draft

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Uploaded
author greg
date Fri, 28 Apr 2017 13:54:18 -0400
parents 5de0658ef884
children e4a17900f1a5
files gene_family_classifier.xml
diffstat 1 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Fri Apr 28 09:08:49 2017 -0400
+++ b/gene_family_classifier.xml	Fri Apr 28 13:54:18 2017 -0400
@@ -277,7 +277,9 @@
        * **Minimum single copy taxa** - minimum number of taxa with single copy genes in the orthogroup.
        * **Minimum taxa present** - minimum number of taxa present in the orthogroup.
 
-     * **Custom selection configuration** - select ‘Yes’ to enable selection of a single copy configuration file.  Scaffold configuration templates (.singleCopy.config) of how to customize single/low-copy orthogroups selection can be found in the scaffold data installed into Galaxy via the PlantTribes Scaffolds Download Data Manager tool, and also available at the PlantTribes GitHub repository (https://github.com/dePamphilis/PlantTribes/config ).  Single/low-copy settings shown in these templates are used as defaults if ‘No’ is selected.
+     * **Custom selection configuration** - select ‘Yes’ to enable selection of a single copy configuration file.  Scaffold configuration templates (.singleCopy.config) of how to customize single/low-copy orthogroups selection can be found in the scaffold data installed into Galaxy via the PlantTribes Scaffolds Download Data Manager tool, and also available at the PlantTribes GitHub `repository`_.  Single/low-copy settings shown in these templates are used as defaults if ‘No’ is selected.
+
+.. _repository: https://github.com/dePamphilis/PlantTribes/tree/master/config
 
        * **Custom selection file** - select a single/low-copy customized configuration file from your history.