<tool id="fast_fiber_tracking" name="Fiber tracking" version="0.13.0">
    <description>using constrained spherical deconvolution </description>
    <requirements>
        <requirement type="package" version="0.13.0">dipy</requirement>
    </requirements>
    <command detect_errors="exit_code"><![CDATA[
python '$__tool_directory__/fast_fiber_tracking.py'
--input $input
--input_extra_files_path '$input.extra_files_path'
--output_csd_direction_field '$output_csd_direction_field'
--output_det_streamlines '$output_det_streamlines'
--output_fa_map '$output_fa_map'
--output_fa_map_files_path '$output_fa_map.files_path'
&>/dev/null
    ]]></command>
    <inputs>
        <param name="input" type="data" format="nifti1" label="dRMI dataset"/>
    </inputs>
    <outputs>
        <data name="output_csd_direction_field" format="png" label="${tool.name}: CSD direction field" />
        <data name="output_det_streamlines" format="png" label="${tool.name}: streamlines" />
        <data name="output_fa_map" format="nifti1" label="${tool.name}: fractional anisotropic" />
    </outputs>
    <tests>
        <test>
        </test>
    </tests>
    <help>
**What it does**

Performs fast fiber tracking using constrained spherical deconvolution (CSD) for local reconstruction and generates
deterministic streamlines using the fiber directions (peaks) from CSD and fractional anisotropic (FA) from DTI as a
stopping criteria for the tracking.

-----

**Options**

    </help>
    <citations>
    </citations>
</tool>